Protein Detail

Protein Information

PDBId & Chain	1H59 : B
Molecule	Insulin-like growth factor-binding protein 5
Residues	45
Sequence
SSE Sequence^*(4)	`EEHE`

^* Secondary structure Elements (SSE) from N to C terminal of the PDB chain. [SSE: H ("Alpha Helix"); E ("Strands")]

Protein Topology

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand] `Ea.Ca.Ca-0.Ea-Ea`

Prefence of topology : False

[ Hover over the plot rectangles to know more about SSE-contact ]

Linear Topology Graph : 1H59_B

Protein Id: 1H59_B

Figure Detail - Blocks: Helix (rectangles), Strands (triangles); Colormap: Red (N-terminal),--(Green)-- Blue (C-Terminal). Spatial Connectivity by arc Lines [Hover over the image to know the SSE detail]

Topology Graph : 1H59_B

Protein Id: 1H59_B

Expand

Figure Detail - Blocks: Helix (circle), Strands (arrow); Colormap: Red (N-terminal), Blue (C-Terminal). Spatial Connectivity by dotted Lines [Hover over the image to know the SSE detail]

Modules in queried Topology

#SSE	SSE string	Contact String	Preferrence	ProteinDB	DomainsDB
3	EEH	Ea.Ca-0	True	3OW2:T, 1VQO:U, 2PUY:A,	d1vq8u1, d1we9a_, d1wjva1, d2puya_, 1vq8U00,

Protein In ProLegoDB with identical/similar Topology

Proteins with Identical Topology

[Same secondary structure composition, contact-pair and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
1h59B00	--	45	Insulin-like growth factor-binding protein 5	View

Protein with similar Topology [same scaffold]

[Same secondary structure composition and contact-pair but of different orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
2YZT	A	66	Uncharacterized protein	View
3BID	D	56	UPF0339 protein NMB1088	View
3BID	H	56	UPF0339 protein NMB1088	View
3FPU	B	66	C-C motif chemokine 3	View
3KU7	A	61	Cell division topological specificity factor	View
3KU7	B	58	Cell division topological specificity factor	View
3ODV	B	38	Potassium channel toxin alpha-KTx 3.1	View
3ONR	A	71	Calcium dodecin	View
3ONR	B	70	Calcium dodecin	View
3ONR	C	70	Calcium dodecin	View
3ONR	D	67	Calcium dodecin	View
3ONR	E	70	Calcium dodecin	View
3ONR	F	71	Calcium dodecin	View
3ONR	G	71	Calcium dodecin	View
3ONR	H	71	Calcium dodecin	View
3ONR	I	71	Calcium dodecin	View
3ONR	J	68	Calcium dodecin	View
3ONR	K	67	Calcium dodecin	View
3ONR	L	71	Calcium dodecin	View
3SZS	A	42	Hellethionin-D	View
3SZS	B	46	Hellethionin-D	View
3SZS	C	46	Hellethionin-D	View
3SZS	D	46	Hellethionin-D	View
3SZS	E	46	Hellethionin-D	View
3SZS	F	46	Hellethionin-D	View
3SZS	G	46	Hellethionin-D	View
3TN2	A	68	C-C motif chemokine 4	View
4FAS	D	49	Uncharacterized protein	View
4MHE	C	61	C-C motif chemokine 18	View
4MHE	D	60	C-C motif chemokine 18	View
4OIJ	A	71	C-C motif chemokine 1	View
4OIJ	B	71	C-C motif chemokine 1	View
4UZ3	C	47	Cell wall-binding endopeptidase-related protein	View
4WPY	A	88	Uncharacterized protein MT1780	View
4XT1	B	67	Fractalkine	View
4ZLT	F	62	C-C motif chemokine 3	View
5COY	A	65	C-C motif chemokine 5	View
5COY	B	65	C-C motif chemokine 5	View
5EKI	A	72	C-C motif chemokine 21	View
5EKI	B	71	C-C motif chemokine 21	View
5EKI	C	70	C-C motif chemokine 21	View
5EKI	D	71	C-C motif chemokine 21	View
5EKI	E	73	C-C motif chemokine 21	View
5EKI	F	70	C-C motif chemokine 21	View
5K2L	A	49	Chitinase, lysozyme	View
5L7A	A	64	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	View
5L7A	B	64	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	View
5L7A	C	68	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	View
5L7A	D	69	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	View
1BHP	A	45	Purothionin A-1	View
1DOK	A	72	C-C motif chemokine 2	View
1F2L	A	64	Fractalkine	View
2FGG	A	83	Uncharacterized protein Rv2632c	View
2FHT	A	68	Viral macrophage inflammatory protein 2	View
2PLH	A	45	Alpha-1-purothionin	View
2Q8R	E	66	C-C motif chemokine 14	View
2RA4	A	65	C-C motif chemokine 13	View
5GJK	B	68	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	View

Proteins with topologies of same secondary structure (H/E) component

[Topologies with same secondary structure composition with different contact-pairs and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
2XGF	C	216	Long-tail fiber protein p37	View
2YVR	A	45	Transcription intermediary factor 1-beta	View
2YVR	B	45	Transcription intermediary factor 1-beta	View
3DDT	A	48	E3 ubiquitin-protein ligase TRIM63	View
3DDT	B	47	E3 ubiquitin-protein ligase TRIM63	View
3DDT	C	44	E3 ubiquitin-protein ligase TRIM63	View
3EGR	A	62	Phenylacetic acid degradation B	View
3OVO	A	56	Ovomucoid	View
3Q1D	A	47	Tripartite motif-containing protein 54	View
3ZOQ	B	48	Putative uncharacterized protein 0.8	View
3ZOQ	C	53	Putative uncharacterized protein 0.8	View
4GI3	C	57	Greglin	View
4HGU	A	40	Silk protease inhibitor 2	View
4L5N	C	50	Early protein GP1B	View
4L5N	D	49	Early protein GP1B	View
4L5N	E	47	Early protein GP1B	View
4L5N	F	48	Early protein GP1B	View
5K3Q	A	43	Tripartite motif-containing protein 5	View
5K3Q	B	43	Tripartite motif-containing protein 5	View
5K3Q	C	42	Tripartite motif-containing protein 5	View
5K3Q	D	41	Tripartite motif-containing protein 5	View
5TDA	A	71	E3 ubiquitin-protein ligase UBR2	View
5TDC	A	70	E3 ubiquitin-protein ligase UBR1	View
1DGW	X	76	Canavalin	View
1HPT	A	56	Serine protease inhibitor Kazal-type 1	View
1LDT	L	46	Leech-derived tryptase inhibitor C	View
1P9G	A	40	Antifungal peptide 2	View
1R0R	I	51	Ovomucoid	View
1TGS	I	55	Serine protease inhibitor Kazal-type 1	View
2BAY	A	56	Pre-mRNA-processing factor 19	View
2ERW	A	53	Thrombin inhibitor infestin	View
2F3C	I	46	Thrombin inhibitor infestin	View
4NJC	A	58		View
5MNJ	D	63	Protein Mdm4	View

Topology view of query protein [ProLego results]

1H59 : B

Topology Information