Protein Detail

Protein Information

PDBId & Chain	4UZ3 : C
Molecule	Cell wall-binding endopeptidase-related protein
Residues	47
Sequence
SSE Sequence^*(4)	`EHHE`

^* Secondary structure Elements (SSE) from N to C terminal of the PDB chain. [SSE: H ("Alpha Helix"); E ("Strands")]

Protein Topology

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand] `Ca.Hr.Ca-0.Cp-Ea`

Prefence of topology : False

[ Hover over the plot rectangles to know more about SSE-contact ]

Linear Topology Graph : 4UZ3_C

Protein Id: 4UZ3_C

Figure Detail - Blocks: Helix (rectangles), Strands (triangles); Colormap: Red (N-terminal),--(Green)-- Blue (C-Terminal). Spatial Connectivity by arc Lines [Hover over the image to know the SSE detail]

Topology Graph : 4UZ3_C

Protein Id: 4UZ3_C

Expand

Figure Detail - Blocks: Helix (circle), Strands (arrow); Colormap: Red (N-terminal), Blue (C-Terminal). Spatial Connectivity by dotted Lines [Hover over the image to know the SSE detail]

Modules in queried Topology

#SSE	SSE string	Contact String	Preferrence	ProteinDB	DomainsDB

Protein In ProLegoDB with identical/similar Topology

Proteins with Identical Topology

[Same secondary structure composition, contact-pair and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
5K2L	A	49	Chitinase, lysozyme	View
1BHP	A	45	Purothionin A-1	View
d1bhpa_	--	45	u'Purothionin A-1'	View

Protein with similar Topology [same scaffold]

[Same secondary structure composition and contact-pair but of different orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
2YZT	A	66	Uncharacterized protein	View
3BID	D	56	UPF0339 protein NMB1088	View
3BID	H	56	UPF0339 protein NMB1088	View
3FPU	B	66	C-C motif chemokine 3	View
3KU7	A	61	Cell division topological specificity factor	View
3KU7	B	58	Cell division topological specificity factor	View
3ODV	B	38	Potassium channel toxin alpha-KTx 3.1	View
3ONR	A	71	Calcium dodecin	View
3ONR	B	70	Calcium dodecin	View
3ONR	C	70	Calcium dodecin	View
3ONR	D	67	Calcium dodecin	View
3ONR	E	70	Calcium dodecin	View
3ONR	F	71	Calcium dodecin	View
3ONR	G	71	Calcium dodecin	View
3ONR	H	71	Calcium dodecin	View
3ONR	I	71	Calcium dodecin	View
3ONR	J	68	Calcium dodecin	View
3ONR	K	67	Calcium dodecin	View
3ONR	L	71	Calcium dodecin	View
3SZS	A	42	Hellethionin-D	View
3SZS	B	46	Hellethionin-D	View
3SZS	C	46	Hellethionin-D	View
3SZS	D	46	Hellethionin-D	View
3SZS	E	46	Hellethionin-D	View
3SZS	F	46	Hellethionin-D	View
3SZS	G	46	Hellethionin-D	View
3TN2	A	68	C-C motif chemokine 4	View
4FAS	D	49	Uncharacterized protein	View
4MHE	C	61	C-C motif chemokine 18	View
4MHE	D	60	C-C motif chemokine 18	View
4OIJ	A	71	C-C motif chemokine 1	View
4OIJ	B	71	C-C motif chemokine 1	View
4WPY	A	88	Uncharacterized protein MT1780	View
4XT1	B	67	Fractalkine	View
4ZLT	F	62	C-C motif chemokine 3	View
5COY	A	65	C-C motif chemokine 5	View
5COY	B	65	C-C motif chemokine 5	View
5EKI	A	72	C-C motif chemokine 21	View
5EKI	B	71	C-C motif chemokine 21	View
5EKI	C	70	C-C motif chemokine 21	View
5EKI	D	71	C-C motif chemokine 21	View
5EKI	E	73	C-C motif chemokine 21	View
5EKI	F	70	C-C motif chemokine 21	View
5L7A	A	64	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	View
5L7A	B	64	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	View
5L7A	C	68	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	View
5L7A	D	69	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	View
1DOK	A	72	C-C motif chemokine 2	View
1F2L	A	64	Fractalkine	View
1H59	B	45	Insulin-like growth factor-binding protein 5	View
2FGG	A	83	Uncharacterized protein Rv2632c	View
2FHT	A	68	Viral macrophage inflammatory protein 2	View
2PLH	A	45	Alpha-1-purothionin	View
2Q8R	E	66	C-C motif chemokine 14	View
2RA4	A	65	C-C motif chemokine 13	View
5GJK	B	68	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	View

Proteins with topologies of same secondary structure (H/E) component

[Topologies with same secondary structure composition with different contact-pairs and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
3C8P	A	46	Viscotoxin A1	View
3C8P	B	46	Viscotoxin A1	View
4NW3	A	51	Histone-lysine N-methyltransferase 2A	View
4PXV	A	47	Chitinase A	View
4PXV	B	47	Chitinase A	View
4PXV	C	48	Chitinase A	View
4PXV	D	47	Chitinase A	View
5BUM	A	49	Chitinase A	View
5BUM	B	49	Chitinase A	View
5E97	B	74	Heparanase	View
5LSI	E	76	Kinetochore-associated protein NSL1 homolog	View
1OKH	A	46	Viscotoxin-A3	View
1WUW	A	45	Beta-hordothionin	View
2DUY	A	64	Competence protein ComEA-related protein	View
3NIR	A	46	Crambin	View
5L9Z	B	74	Heparanase	View

Topology view of query protein [ProLego results]

4UZ3 : C

Topology Information