ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d12asa_ d.104.1.1 327 see topology u'Aspartate--ammonia ligase' Escherichia coli
ASTRAL-1.75B d16vpa_ d.180.1.1 311 see topology u'Tegument protein VP16' Human alphaherpesvirus 1
ASTRAL-1.75B d1914a1 d.49.1.1 78 see topology u'Signal recognition particle 14 kDa protein' Mus musculus
ASTRAL-1.75B d1914a2 d.49.1.1 85 see topology u'Signal recognition particle 14 kDa protein' Mus musculus
ASTRAL-1.75B d1a04a1 a.4.6.2 67 see topology u'Nitrate/nitrite response regulator protein NarL' Escherichia coli
ASTRAL-1.75B d1a04a2 c.23.1.1 138 see topology u'Nitrate/nitrite response regulator protein NarL' Escherichia coli
ASTRAL-1.75B d1a0aa_ a.38.1.1 63 see topology u'Phosphate system positive regulatory protein PHO4' Saccharomyces cerevisiae
ASTRAL-1.75B d1a0ca_ c.1.15.3 437 see topology u'Xylose isomerase' Thermoanaerobacterium thermosulfurigenes
ASTRAL-1.75B d1a0ia1 b.40.4.6 101 see topology u'DNA ligase' Escherichia virus T7
ASTRAL-1.75B d1a0ia2 d.142.2.1 231 see topology u'DNA ligase' Escherichia virus T7
ASTRAL-1.75B d1a0pa1 a.60.9.1 91 see topology u'Tyrosine recombinase XerD' Escherichia coli
ASTRAL-1.75B d1a0pa2 d.163.1.1 180 see topology u'Tyrosine recombinase XerD' Escherichia coli
ASTRAL-1.75B d1a0tp_ f.4.3.2 413 see topology u'Sucrose porin' Salmonella enterica
ASTRAL-1.75B d1a12a_ b.69.5.1 401 see topology u'Regulator of chromosome condensation' Homo sapiens
ASTRAL-1.75B d1a17a_ a.118.8.1 159 see topology u'Serine/threonine-protein phosphatase 5' Homo sapiens
ASTRAL-1.75B d1a1va1 c.37.1.14 135 see topology u'Genome polyprotein' Hepatitis C virus
ASTRAL-1.75B d1a1va2 c.37.1.14 294 see topology u'Genome polyprotein' Hepatitis C virus
ASTRAL-1.75B d1a1xa_ b.63.1.1 106 see topology u'Protein p13 MTCP-1' Homo sapiens
ASTRAL-1.75B d1a26a1 a.41.1.1 135 see topology u'Poly [ADP-ribose] polymerase 1' Gallus gallus
ASTRAL-1.75B d1a26a2 d.166.1.2 216 see topology u'Poly [ADP-ribose] polymerase 1' Gallus gallus
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Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins