ProLego Protein as lego blocks ...
 

Topology view of query protein [ProLego results]

Protein Information
PDBId & Chain3VV1 : B
MoleculeGalectin
Residues140
Sequence
SSE Sequence*(14) EEEEEEEEEEEEEE
* Secondary structure Elements (SSE) from N to C terminal of the PDB chain. [SSE: H ("Alpha Helix"); E ("Strands")]
Protein Topology 

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand]
Ea.0.Ea.Ea.Ea.0.Ea.0.0.Ea.Ea.0.Ea-0.0.0.0.0.0.0.0.0.0.0.0-0.0.0.0.Ep.Ea.0.0.Ea.0.0-0.0.0.0.0.0.0.0.0.0-0.0.0.0.Ea.0.0.0.0-0.0.0.Ep.Ep.Ep.0.0-0.0.Ea.0.Ea.0.0-0.0.0.0.0.0-0.0.0.Ea.0-0.0.Ep.0-0.Ea.Ea-0.Ep-Ea

Prefence of topology : False

[ Hover over the plot rectangles to know more about SSE-contact ]

Linear Topology Graph : 3VV1_B
shapeImage
Protein Id: 3VV1_B

Figure Detail - Blocks: Helix (rectangles), Strands (triangles); Colormap: Red (N-terminal),--(Green)-- Blue (C-Terminal). Spatial Connectivity by arc Lines [Hover over the image to know the SSE detail]

Topology Graph : 3VV1_B
shapeImage
Protein Id: 3VV1_B

Figure Detail - Blocks: Helix (circle), Strands (arrow); Colormap: Red (N-terminal), Blue (C-Terminal). Spatial Connectivity by dotted Lines [Hover over the image to know the SSE detail]

Modules in queried Topology
#SSE SSE string Contact String Preferrence  ProteinDB  DomainsDB
3 EEE Ea.0-0 True 2YFV:C, 2ZJR:U, 3B08:B, 3B08:E, 3B08:H, 3B08:K, 3D2Q:D, 3EGG:D, 3GL6:A, 3HVQ:D, 3KXY:Y, 3MMY:B, 3MMY:D, 3MMY:F, 3MMY:H, 3O7A:A, 3TND:D, 3TND:F, 3ZG9:A, 4EAZ:C, 4EAZ:D, 4LM6:A, 4LM6:C, 4LMS:A, 4LMX:A, 4LMX:C, 4LMX:E, 4LMX:G, 4LMX:I, 4LMX:K, 4MMS:A, 4MMS:C, 4MMS:E, 4Q4W:4, 4QF2:A, 4QF2:B, 4QF2:C, 4QF2:D, 4QF3:A, 4QF3:B, 4WJW:A, 5E4X:A, 5IYZ:E, 5KX5:E, 1D4M:4, 1G3J:B, 1HXS:4, 1J8E:A, 1JY2:O, 1VPZ:A, 1XG0:A, 1XG0:B, 1XU1:R, 2BTI:A, d1cxxa2, d1k0ra4, d1lv3a_, d1wvka_, d1xg0a_, d1xpaa2, d1xu1r_, d1xu2r_, d2btia_, d2bv3a4, d2glia4, d2gtlm2, d2zjru1, d3ryce_, 1e0aB00, 1g3jD00, 1jy2O00, 1lv3A00, 1wvkA00, 1xg0B00, 2fyuI00, 2gliA04,
3 EEE 0.Ea-0 True 2Y8T:B, 2Y8T:E, 2ZJR:Z, 3H31:A, 3O27:B, 3SF4:D, 3SF4:E, 3SF4:F, 4I6M:D, 4XO1:A, 4YIZ:B, 4YIZ:D, 4YIZ:F, 5DM6:Z, 5ITM:A, 5ITM:B, 5ITM:C, 5ITM:D, 5ITM:E, 5ITM:F, 1AVY:A, 1HLQ:A, 1ICF:I, 1ISU:A, 1PML:A, 2ATC:B, 2DLB:A, 2GGV:A, d1hlqa_, d1icfi_, d1isua_, d1ppji_, d1rwsa_, d1skza1, d1tdha3, d1yfba1, d2dlba1, d2i9aa2, d2qam01, d2zdra1, d3h31a_, 1avyA00, 1avyB00, 1avyA00, 1avyB00, 1hlqA00, 1icfI00, 1ppjI00, 1rwsA00, 2fd6A02,
3 EEE Ea.Ea-0 True 3FIF:F, 3MLQ:G, 4A94:C, 4EAG:B, 4EAI:B, 4OEL:B, 4PKF:C, 5BWD:C, 5DZD:A, 5K2M:E, 2BZY:A, 2QN5:B, 2V8Q:B, d1co4a_, d1dl6a_, d1egfa_, d1gl1i_, d1k36a_, d1k81a_, d1ng2a1, d1nvpd2, d1pina1, d1tpga2, d1twfi1, d1twfi2, d2akla2, d2dara2, d2k4xa1, d2v8qb1, 1co4A00, 1dl6A00, 1co4A00, 1dl6A00, 1k36A00, 1nvpD02,
4 EEEE Ea.0.Ea-0.0-0 True 3BG4:D, 3UA0:A, 3UCI:A, 4R5R:A, 4R5R:B, 4ZRP:C, 4ZRP:D, 5B4Y:B, 5C13:A, 5C13:G, 5F0E:B, 5F86:B, 5JQP:B, 5KXH:B, 5KY0:B, 5KY4:B, 1J2L:A, 1KIG:L, 1LSL:A, 2QSK:A, 2W2N:E, d1ataa_, d1b9wa2, d1i07a_, d1j2la_, d1jmab1, d1ppqa_, d1q4ga2, d2i9aa1, d2j01y1, d2qqra2, 1eqgA01, 1fycA00, 1i07A00, 1xkbA01, 2fd6A01,
4 EEEE 0.Ea.Ea-0.0-0 True 2YH9:A, 2YH9:B, 2YH9:C, 3OW2:Z, 3UL5:C, 4YX1:A, 4YX1:B, 5U6Z:A, 1VQO:1, 2QRD:B, d1vq811, d2f1la1, d2qlvb2, 1vq8100, 2f1lA02,
4 EEEE Ea.Ea.Ea-0.0-0 True 4A94:D, 5JB9:E, 1XDT:R, d1autl1, d1auua_, d1eaic_, d1g1ta2, d1hx2a_, d1ijqa2, d1m7ja2, d1nzia2, d1szba2, d1tfia_, d1xdtr_, d2bz6l_, d2y5fl_, d3bpse1, 1auuA00, 1auuA00, 1eaiC00, 1hx2A00, 1moxD00, 1nziB02, 1ridA03, 1tfiA00, 1wj2A00, 2bz6L00,
4 EEEE Ea.Ea.0-0.0-0 True 3IGM:A, 3IGM:B, 5DM6:F, 5FGO:A, 5FGO:C, 5FGO:E, 5FGO:F, 2WH7:A, d1pd0a5,
4 EEEE Ea.0.Ea-0.0-Ep False d1bmlc3,
4 EEEE 0.Ea.0-0.0-Ea False d1jhna3, d1nlta3, 1y8eB04,
4 EEEE Ea.0.0-0.0-0 True 1L2W:I, 1RGV:A, 1WZ3:A, 2FGO:A, 4BL0:B, d1l2wi_, d1wz3a1, d2fgoa_,
4 EEEE 0.0.Ea-0.0-0 True 3ZIA:I, 3ZIA:S, 5LSL:E, 5LSL:G, 5LSL:H, 2DSR:G, d2dsrg1,
4 EEEE 0.Ea.Ea-0.0-Ea False 4LE9:A, d1xi7a_,
5 EEEEE Ea.0.Ea.Ea-0.0.0-0.0-0 False 1R8O:A, d1v0ea2,
5 EEEEE Ea.Ea.Ea.0-0.0.0-0.0-0 False 4JZE:L, 5PAX:A, d2ct7a1, 1kliL00,
5 EEEEE Ea.0.0.Ea-0.0.0-0.0-0 True 3O27:A, 1MVF:D, d1mvfd_, 1mvfD00,
5 EEEEE Ea.Ea.0.Ea-0.0.0-0.0-0 True 3BK3:C, 3BK3:D, 3QR7:A, 3QR7:B, 3VTO:A, 3VTO:B, 3VTO:C, 3VTO:P, 3VTO:Q, 3VTO:R, 5C6P:B,
Protein In ProLegoDB with identical/similar Topology