ProLego Protein as lego blocks ...

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
Residue >=
Residue <=
Molecule: [Protein molecule containing the word as query]
Source: [Source organism of protein ]

Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d1clvi_ g.3.2.1 32 see topology u'Alpha-amylase inhibitor AAI' Amaranthus hypochondriacus
ASTRAL-1.75B d1k91a_ b.104.1.1 37 see topology u'Calreticulin' Rattus norvegicus
CATH 3.5 2o9uX00 3.10.450.10 96 see topology Monellin chain B Dioscoreophyllum cumminsii
ASTRAL-1.75B d1jm7a_ g.44.1.1 103 see topology u'Breast cancer type 1 susceptibility protein' Homo sapiens
ASTRAL-1.75B d2cclb1 a.139.1.1 59 see topology u'Endo-1,4-beta-xylanase Y' Ruminiclostridium thermocellum
CATH 3.5 1jm7A00 103 see topology Breast cancer type 1 susceptibility protein Homo sapiens
ASTRAL-1.75B d1rf8b_ a.210.1.1 100 see topology u'Eukaryotic initiation factor 4F subunit p150' Saccharomyces cerevisiae
ASTRAL-1.75B d2auwa1 a.35.1.10 64 see topology u'Uncharacterized protein' Nitrosomonas europaea
ASTRAL-1.75B d1rfya_ a.2.13.1 89 see topology u'Transcriptional repressor TraM' Agrobacterium tumefaciens
ASTRAL-1.75B d1ppjf_ f.27.1.1 99 see topology u'Cytochrome b-c1 complex subunit 7' Bos taurus
CATH 3.5 2fyuF00 1.10.1090.10 106 see topology Cytochrome b-c1 complex subunit 7 Bos taurus
ASTRAL-1.75B d2j01x1 d.12.1.1 93 see topology
ASTRAL-1.75B d4aeaa_ g.7.1.1 67 see topology u'Alpha-elapitoxin-Nk2a' Naja kaouthia
ASTRAL-1.75B d2b5id1 g.18.1.1 59 see topology u'Interleukin-2 receptor subunit alpha' Homo sapiens
ASTRAL-1.75B d2dtge1 b.1.2.1 102 see topology
ASTRAL-1.75B d2alca_ g.38.1.1 65 see topology u'Regulatory protein alcR' Aspergillus nidulans
CATH 3.5 1f4sP00 65 see topology Regulatory protein alcR Aspergillus nidulans
ASTRAL-1.75B d2zxya_ a.3.1.0 86 see topology u'Cytochrome c552' Aquifex aeolicus
CATH 3.5 1hhnA00 101 see topology Calreticulin Rattus norvegicus
ASTRAL-1.75B d1zt3a_ g.28.1.1 80 see topology u'Insulin-like growth factor-binding protein 1' Homo sapiens
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Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins