ProLego Protein as lego blocks ...
 
Protein Information
PDBId & Chain3OMD : A
MoleculeUncharacterized protein
Residues141
Sequence
SSE Sequence*(7) HHHHHHH
Protein Topology 

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand]
Hr.Hr.Ha.0.0.Hp-Hr.0.0.0.0-0.Ha.0.0-0.0.0-0.0-0

Prefence of topology : False

Linear Topology Graph : 3OMD_A
shapeImage
Protein Id: 3OMD_A
Topology Graph : 3OMD_A
shapeImage
Protein Id: 3OMD_A
Modules in queried Topology
#SSE SSE string Contact String Preferrence  ProteinDB  DomainsDB
3 HHH Hr.Hr-Hr True 2XVC:A, 3C57:B, 3E7L:A, 3E7L:C, 3E7L:D, 3FGH:A, 3I71:A, 3SJM:A, 3SJM:B, 3U2B:C, 4A3N:A, 4D6K:A, 4D6K:B, 4D6K:C, 4D6K:D, 4D6K:E, 4L5E:A, 4QR9:A, 4QR9:B, 4S2Q:D, 4X86:B, 4Y60:C, 5DUK:A, 5DUK:B, 5TW1:E, 1GUU:A, 1GVD:A, 1L0O:C, 1UJ8:A, 2CJJ:A, 2HDZ:A, 2OOA:A, d1a6qa1, d1efub3, d1fexa_, d1g2ha_, d1gv2a2, d1gvda_, d1hlva2, d1iioa_, d1irza_, d1iufa2, d1j3da_, d1k78a2, d1l0oc_, d1l6ja1, d1lbua1, d1m1eb_, d1ofcx1, d1qzea1, d1rp3a1, d1rq6a_, d1smyf1, d1ttea1, d1u78a2, d1uj8a1, d1uxca_, d1uzca_, d1veka_, d1w0ua_, d1wgxa_, d1wiva_, d1x58a1, d1xb2b1, d1xc5a1, d2cfxa1, d2cg4a1, d2cjja1, d2cosa1, d2cp8a1, d2cqra1, d2crga1, d2crna1, d2cyya1, d2daha1, d2diia1, d2dkla1, d2doda1, d2hdza_, d2lefa_, d2ve8a_, d4a3na_, 1bbyA00, 1bbyA00, 1dp3A00, 1efuB01, 1fexA00, 1g2hA00, 1gt0D00, 1gvdA00, 1hsmA00, 1ifyA00, 1iioA00, 1irzA00, 1iv6A00, 1k78I00, 1l0oC00, 1l8yA00, 1rq6A00, 1uxdA00, 1uzcA00, 1w0tA00, 1w0uA00, 1wivA00, 2lefA00,
3 HHH Hr.Ha-0 False 3GNA:A, 3IM3:A, 3TER:A, 3TER:B, 4E45:G, 4F9K:B, 4F9K:C, 4F9K:D, 4KP3:D, d1kxpd3, d1tjla1, d2jrxa1, d3im3a_,
3 HHH Ha.0-0 False 3BPJ:A, 3BPJ:B, 3BPJ:C, 3BPJ:D, 3MTU:E, 3MTU:F, 4CLQ:B, 4HFX:A, 4IAO:C, 4IAO:D, 4OM3:A, 4X86:A, 4YTW:A, 4YTW:C, 5FD9:A, 1YKH:B, 2B9C:A, d1ykhb1, d2bskb1,
3 HHH 0.Hp-0 False 2ZSI:B, 3CS5:A, 3CS5:B, 3CS5:D, 4EFA:G, 4ICG:A, 4ICG:B, 5APP:A, 1LGH:A, 1M1J:A, 2F60:K, d1lgha_, d1qo8a1, 1k1fD00, 1lghA00, 1m1jA00,
4 HHHH Hr.Hr.Ha-Hr.0-0 False 1EZJ:A, d1v64a_,
4 HHHH Ha.0.0-0.0-0 True 3EPY:A, 3EPY:B, d1rp3b_,
4 HHHH 0.0.Hp-0.0-0 True 3O0Z:A, 3O0Z:C, 4B0F:A, 4N5B:A, 4N5B:B, 4N5B:C, 4N5B:D, 4N5B:E, 4N5B:F, 4N5B:G, 4N5B:H,
Protein In ProLegoDB with identical/similar Topology