ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d2dkta2 g.93.1.1 56 see topology u'RING finger and CHY zinc finger domain-containing protein 1' Mus musculus
ASTRAL-1.75B d2pkgc1 g.92.1.1 80 see topology u'Small t antigen' Macaca mulatta polyomavirus 1
ASTRAL-1.75B d2b9da1 g.91.1.1 52 see topology u'Protein E7' Mupapillomavirus 1
ASTRAL-1.75B d2ewla1 g.91.1.1 52 see topology u'Protein E7' Alphapapillomavirus 7
ASTRAL-1.75B d2fk4a1 g.90.1.1 64 see topology u'Protein E6' Alphapapillomavirus 9
ASTRAL-1.75B d1zlhb1 g.9.1.3 37 see topology u'Carboxypeptidase inhibitor' Rhipicephalus bursa
ASTRAL-1.75B d1h5oa_ g.9.1.2 42 see topology u'Crotamine' Crotalus durissus
ASTRAL-1.75B d1bdsa_ g.9.1.1 43 see topology u'DeltaKappa-actitoxin-Avd4a' Anemonia sulcata
ASTRAL-1.75B d1bnba_ g.9.1.1 38 see topology u'Beta-defensin 12' Bos taurus
ASTRAL-1.75B d1ewsa_ g.9.1.1 32 see topology u'Corticostatin-related peptide RK-1' Oryctolagus cuniculus
ASTRAL-1.75B d1fd3a_ g.9.1.1 41 see topology u'Beta-defensin 4A' Homo sapiens
ASTRAL-1.75B d1kj6a_ g.9.1.1 45 see topology u'Beta-defensin 103' Homo sapiens
ASTRAL-1.75B d1sh1a_ g.9.1.1 48 see topology u'Delta-stichotoxin-She1a' Stichodactyla helianthus
ASTRAL-1.75B d1ut3a_ g.9.1.1 38 see topology u'Spheniscin-2' Aptenodytes patagonicus
ASTRAL-1.75B d2nlsa_ g.9.1.1 36 see topology u'Beta-defensin 1' Homo sapiens
ASTRAL-1.75B d2dkta1 g.89.1.1 74 see topology u'RING finger and CHY zinc finger domain-containing protein 1' Mus musculus
ASTRAL-1.75B d2fyga1 g.86.1.1 123 see topology u'Replicase polyprotein 1a' SARS-related coronavirus
ASTRAL-1.75B d1x4sa1 g.85.1.2 46 see topology u'Zinc finger HIT domain-containing protein 2' Homo sapiens
ASTRAL-1.75B d2dj8a1 g.85.1.1 47 see topology u'Protein CBFA2T1' Homo sapiens
ASTRAL-1.75B d1vfia1 g.84.1.1 92 see topology u'Vanadium-binding protein 2' Ascidia sydneiensis
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Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins