ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d1avwb_ b.42.4.1 171 see topology u'Trypsin inhibitor A' Glycine max
ASTRAL-1.75B d1aw9a1 a.45.1.1 135 see topology u'Glutathione transferase III(A)' Zea mays
ASTRAL-1.75B d1awcb_ d.211.1.1 153 see topology u'GA-binding protein subunit beta-1' Mus musculus
ASTRAL-1.75B d1ax8a_ a.26.1.1 130 see topology u'Leptin' Homo sapiens
ASTRAL-1.75B d1axib1 b.1.2.1 85 see topology u'Growth hormone receptor' Homo sapiens
ASTRAL-1.75B d1axib2 b.1.2.1 106 see topology u'Growth hormone receptor' Homo sapiens
ASTRAL-1.75B d1ay2a_ d.24.1.1 157 see topology u'Fimbrial protein' Neisseria gonorrhoeae
ASTRAL-1.75B d1ayaa_ d.93.1.1 101 see topology u'Tyrosine-protein phosphatase non-receptor type 11' Mus musculus
ASTRAL-1.75B d1ayea2 d.58.3.1 92 see topology u'Carboxypeptidase A2' Homo sapiens
ASTRAL-1.75B d1ayja_ g.3.7.5 50 see topology u'Defensin-like protein 1' Raphanus sativus
ASTRAL-1.75B d1aym.1 b.121.4.1 259 see topology — —
ASTRAL-1.75B d1aym1_ b.121.4.1 285 see topology u'Genome polyprotein' Human rhinovirus sp.
ASTRAL-1.75B d1aym3_ b.121.4.1 238 see topology u'Genome polyprotein' Human rhinovirus sp.
ASTRAL-1.75B d1ayoa_ b.2.4.1 130 see topology u'Alpha-2-macroglobulin' Bos taurus
ASTRAL-1.75B d1azoa_ c.52.1.14 212 see topology u'DNA mismatch repair protein MutH' Escherichia coli
ASTRAL-1.75B d1azsa_ d.58.29.1 190 see topology u'Adenylate cyclase type 5' Canis lupus
ASTRAL-1.75B d1azsc1 a.66.1.1 116 see topology u'Guanine nucleotide-binding protein G(s) subunit alpha isoforms short' Bos taurus
ASTRAL-1.75B d1azza_ b.47.1.2 222 see topology u'Brachyurin' Leptuca pugilator
ASTRAL-1.75B d1b0aa2 c.58.1.2 121 see topology u'Bifunctional protein FolD' Escherichia coli
ASTRAL-1.75B d1b0ba_ a.1.1.2 141 see topology u'Hemoglobin-1' Phacoides pectinatus
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins