ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d1at0a_ b.86.1.1 142 see topology u'Protein hedgehog' Drosophila melanogaster
ASTRAL-1.75B d1at3a_ b.57.1.1 217 see topology u'UL26 protease' Human alphaherpesvirus 2
ASTRAL-1.75B d1ataa_ g.22.1.1 62 see topology u'Trypsin inhibitor' Ascaris suum
ASTRAL-1.75B d1atga_ c.94.1.1 231 see topology u'Binding protein' Azotobacter vinelandii
ASTRAL-1.75B d1atia1 c.51.1.1 111 see topology u'Glycine--tRNA ligase' Thermus thermophilus
ASTRAL-1.75B d1atia2 d.104.1.1 326 see topology u'Glycine--tRNA ligase' Thermus thermophilus
ASTRAL-1.75B d1atza_ c.62.1.1 184 see topology u'von Willebrand factor' Homo sapiens
ASTRAL-1.75B d1auaa1 a.5.3.1 93 see topology u'SEC14 cytosolic factor' Saccharomyces cerevisiae
ASTRAL-1.75B d1auaa2 c.13.1.1 203 see topology u'SEC14 cytosolic factor' Saccharomyces cerevisiae
ASTRAL-1.75B d1auia_ d.159.1.3 378 see topology u'Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform' Homo sapiens
ASTRAL-1.75B d1auib_ a.39.1.5 165 see topology u'Calcineurin subunit B type 1' Homo sapiens
ASTRAL-1.75B d1auka_ c.76.1.2 480 see topology u'Arylsulfatase A' Homo sapiens
ASTRAL-1.75B d1auoa_ c.69.1.14 218 see topology u'Carboxylesterase 2' Pseudomonas fluorescens
ASTRAL-1.75B d1autc_ b.47.1.2 228 see topology u'Vitamin K-dependent protein C' Homo sapiens
ASTRAL-1.75B d1autl1 g.3.11.1 47 see topology u'Vitamin K-dependent protein C' Homo sapiens
ASTRAL-1.75B d1auua_ b.35.2.1 55 see topology u'Levansucrase and sucrase synthesis operon antiterminator' Bacillus subtilis
ASTRAL-1.75B d1auya_ b.121.4.6 163 see topology u'Coat protein' Turnip yellow mosaic virus
ASTRAL-1.75B d1avgi_ b.60.1.3 142 see topology u'Triabin' Meccus pallidipennis
ASTRAL-1.75B d1avo.1 a.24.8.1 200 see topology — —
ASTRAL-1.75B d1avqa_ c.52.1.13 228 see topology u'Exonuclease' Escherichia virus Lambda
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins