ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d1aola_ b.20.1.1 228 see topology u'Envelope glycoprotein' Murine leukemia virus
ASTRAL-1.75B d1aopa1 d.58.36.1 60 see topology u'Sulfite reductase [NADPH] hemoprotein beta-component' Escherichia coli
ASTRAL-1.75B d1aopa2 d.58.36.1 80 see topology u'Sulfite reductase [NADPH] hemoprotein beta-component' Escherichia coli
ASTRAL-1.75B d1aopa3 d.134.1.1 171 see topology u'Sulfite reductase [NADPH] hemoprotein beta-component' Escherichia coli
ASTRAL-1.75B d1aopa4 d.134.1.1 145 see topology u'Sulfite reductase [NADPH] hemoprotein beta-component' Escherichia coli
ASTRAL-1.75B d1aora1 a.110.1.1 395 see topology u'Tungsten-containing aldehyde ferredoxin oxidoreductase' Pyrococcus furiosus
ASTRAL-1.75B d1aoya_ a.4.5.3 78 see topology u'Arginine repressor' Escherichia coli
ASTRAL-1.75B d1aoza1 b.6.1.3 129 see topology u'L-ascorbate oxidase' Cucurbita pepo
ASTRAL-1.75B d1aoza2 b.6.1.3 209 see topology u'L-ascorbate oxidase' Cucurbita pepo
ASTRAL-1.75B d1aoza3 b.6.1.3 214 see topology u'L-ascorbate oxidase' Cucurbita pepo
ASTRAL-1.75B d1apja_ g.23.1.1 74 see topology u'Fibrillin-1' Homo sapiens
ASTRAL-1.75B d1apsa_ d.58.10.1 98 see topology u'Acylphosphatase-2' Equus caballus
ASTRAL-1.75B d1apy.1 d.153.1.5 302 see topology — —
ASTRAL-1.75B d1aqca_ b.55.1.2 121 see topology u'Amyloid beta A4 precursor protein-binding family A member 1' Homo sapiens
ASTRAL-1.75B d1aqea_ a.138.1.1 110 see topology u'Cytochrome c3, 26 kDa' Desulfomicrobium norvegicum
ASTRAL-1.75B d1aqta2 b.93.1.1 85 see topology u'ATP synthase epsilon chain' Escherichia coli
ASTRAL-1.75B d1aqza_ d.1.1.3 142 see topology u'Ribonuclease mitogillin' Aspergillus restrictus
ASTRAL-1.75B d1arba_ b.47.1.1 263 see topology u'Protease 1' Achromobacter lyticus
ASTRAL-1.75B d1asha_ a.1.1.2 147 see topology u'Extracellular globin' Ascaris suum
ASTRAL-1.75B d1asta_ d.92.1.8 200 see topology u'Astacin' Astacus astacus
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins