ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d1akha_ a.4.1.1 49 see topology u'Mating-type protein A1' Saccharomyces cerevisiae
ASTRAL-1.75B d1akoa_ d.151.1.1 268 see topology u'Exodeoxyribonuclease III' Escherichia coli
ASTRAL-1.75B d1al3a_ c.94.1.1 237 see topology u'HTH-type transcriptional regulator CysB' Klebsiella aerogenes
ASTRAL-1.75B d1alla_ a.1.1.3 160 see topology u'Allophycocyanin alpha chain' Arthrospira platensis
ASTRAL-1.75B d1allb_ a.1.1.3 160 see topology u'Allophycocyanin beta chain' Arthrospira platensis
ASTRAL-1.75B d1alna1 c.97.1.1 150 see topology u'Cytidine deaminase' Escherichia coli
ASTRAL-1.75B d1alna2 c.97.1.1 144 see topology u'Cytidine deaminase' Escherichia coli
ASTRAL-1.75B d1alua_ a.26.1.1 157 see topology u'Interleukin-6' Homo sapiens
ASTRAL-1.75B d1alva_ a.39.1.8 173 see topology u'Calpain small subunit 1' Sus scrofa
ASTRAL-1.75B d1alya_ b.22.1.1 146 see topology u'CD40 ligand' Homo sapiens
ASTRAL-1.75B d1am2a_ b.86.1.2 181 see topology u'DNA gyrase subunit A' Mycobacterium xenopi
ASTRAL-1.75B d1am7a_ d.2.1.4 150 see topology u'Endolysin' Escherichia virus Lambda
ASTRAL-1.75B d1amua_ e.23.1.1 509 see topology u'Gramicidin S synthase 1' Brevibacillus brevis
ASTRAL-1.75B d1amxa_ b.2.3.1 150 see topology u'Collagen adhesin' Staphylococcus aureus
ASTRAL-1.75B d1an8a1 b.40.2.2 93 see topology u'Exotoxin type C' Streptococcus pyogenes
ASTRAL-1.75B d1aoaa1 a.40.1.1 131 see topology u'Plastin-3' Homo sapiens
ASTRAL-1.75B d1aoaa2 a.40.1.1 116 see topology u'Plastin-3' Homo sapiens
ASTRAL-1.75B d1aoca_ g.17.1.5 175 see topology u'Coagulogen' Tachypleus tridentatus
ASTRAL-1.75B d1aoea_ c.71.1.1 192 see topology u'Dihydrofolate reductase' Candida albicans
ASTRAL-1.75B d1aoha_ b.2.2.2 143 see topology u'Cellulosomal-scaffolding protein A' Ruminiclostridium thermocellum
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins