ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d1adua3 g.51.1.1 122 see topology u'DNA-binding protein' Human mastadenovirus C
ASTRAL-1.75B d1ae9a_ d.163.1.1 172 see topology u'Integrase' Escherichia virus Lambda
ASTRAL-1.75B d1aepa_ a.63.1.1 153 see topology u'Apolipophorin-3b' Locusta migratoria
ASTRAL-1.75B d1af7a1 a.58.1.1 81 see topology u'Chemotaxis protein methyltransferase' Salmonella enterica
ASTRAL-1.75B d1af7a2 c.66.1.8 193 see topology u'Chemotaxis protein methyltransferase' Salmonella enterica
ASTRAL-1.75B d1afia_ d.58.17.1 72 see topology u'Mercuric transport protein periplasmic component' Shigella flexneri
ASTRAL-1.75B d1afpa_ g.26.1.1 51 see topology u'Antifungal protein' Aspergillus giganteus
ASTRAL-1.75B d1afwa1 c.95.1.1 266 see topology u'3-ketoacyl-CoA thiolase, peroxisomal' Saccharomyces cerevisiae
ASTRAL-1.75B d1agja_ b.47.1.1 242 see topology u'Exfoliative toxin A' Staphylococcus aureus
ASTRAL-1.75B d1agqa_ g.17.1.2 91 see topology u'Glial cell line-derived neurotrophic factor' Rattus norvegicus
ASTRAL-1.75B d1ah7a_ a.124.1.1 245 see topology u'Phospholipase C' Bacillus cereus
ASTRAL-1.75B d1ahoa_ g.3.7.1 64 see topology u'Alpha-mammal toxin AaH2' Androctonus australis
ASTRAL-1.75B d1ahsa_ b.19.1.1 126 see topology u'Core protein VP7' African horse sickness virus
ASTRAL-1.75B d1aiha_ d.163.1.1 170 see topology u'Integrase' Haemophilus phage HP1
ASTRAL-1.75B d1aisa1 d.129.1.1 92 see topology u'TATA-box-binding protein' Pyrococcus woesei
ASTRAL-1.75B d1aisb1 a.74.1.2 98 see topology u'Transcription initiation factor IIB' Pyrococcus woesei
ASTRAL-1.75B d1aisb2 a.74.1.2 95 see topology u'Transcription initiation factor IIB' Pyrococcus woesei
ASTRAL-1.75B d1aiwa_ b.72.2.1 62 see topology u'Endoglucanase Z' Dickeya dadantii
ASTRAL-1.75B d1ajsa_ c.67.1.1 412 see topology u'Aspartate aminotransferase, cytoplasmic' Sus scrofa
ASTRAL-1.75B d1ak0a_ a.124.1.2 264 see topology u'Nuclease P1' Penicillium citrinum
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins