ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
CATH 3.5 1ci9A00 3.40.710.10 377 see topology Esterase EstB Burkholderia gladioli
CATH 3.5 1cixA00 4.10.40.20 44 see topology Tachystatin-A2 Tachypleus tridentatus
CATH 3.5 1cjwA00 3.40.630.30 166 see topology Serotonin N-acetyltransferase Ovis aries
CATH 3.5 1cjxA01 3.10.180.10 150 see topology 4-hydroxyphenylpyruvate dioxygenase Pseudomonas fluorescens
CATH 3.5 1ckaA00 2.30.30.40 57 see topology Adapter molecule crk Mus musculus
CATH 3.5 1cksB00 3.30.170.10 78 see topology Cyclin-dependent kinases regulatory subunit 2 Homo sapiens
CATH 3.5 1cktA00 1.10.30.10 71 see topology High mobility group protein B1 Rattus norvegicus
CATH 3.5 1ckvA00 3.90.56.10 141 see topology Methane monooxygenase regulatory protein B Escherichia coli
CATH 3.5 1cl8A00 3.40.580.10 261 see topology Type-2 restriction enzyme EcoRI Escherichia coli
CATH 3.5 1cmbA00 1.10.140.10 104 see topology Met repressor Escherichia coli
CATH 3.5 1cmxA00 3.40.532.10 214 see topology Ubiquitin carboxyl-terminal hydrolase YUH1 Saccharomyces cerevisiae
CATH 3.5 1cnt300 1.20.1250.10 146 see topology Ciliary neurotrophic factor Homo sapiens
CATH 3.5 1cnzA00 3.40.718.10 363 see topology 3-isopropylmalate dehydrogenase Salmonella enterica
CATH 3.5 1co4A00 3.90.430.10 42 see topology Metal-activated transcriptional activator protein AMT1 [Candida] glabrata
CATH 3.5 1colA00 1.10.490.30 197 see topology Colicin-A Escherichia coli
CATH 3.5 1couA00 2.10.25.10 85 see topology Anti-coagulant protein C2 Ancylostoma caninum
CATH 3.5 1cozA00 3.40.50.620 126 see topology Glycerol-3-phosphate cytidylyltransferase Bacillus subtilis
CATH 3.5 1cp2A00 3.40.50.300 269 see topology Nitrogenase iron protein 1 Clostridium pasteurianum
CATH 3.5 1cpqA00 1.20.120.10 129 see topology Cytochrome c' Rhodobacter capsulatus
CATH 3.5 1cptA00 1.10.630.10 412 see topology Cytochrome P450-terp Pseudomonas sp.
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins