ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
CATH 3.5 1ccwA00 3.40.50.280 137 see topology Glutamate mutase sigma subunit Clostridium cochlearium
CATH 3.5 1cczA01 2.60.40.10 93 see topology Lymphocyte function-associated antigen 3 Homo sapiens
CATH 3.5 1cczA02 2.60.40.10 78 see topology Lymphocyte function-associated antigen 3 Homo sapiens
CATH 3.5 1cdcA00 2.60.40.10 96 see topology T-cell surface antigen CD2 Rattus norvegicus
CATH 3.5 1ceoA00 3.20.20.80 332 see topology Endoglucanase C Ruminiclostridium thermocellum
CATH 3.5 1cexA00 3.40.50.1820 197 see topology Cutinase 1 Nectria haematococca
CATH 3.5 1cf7A00 1.10.10.10 67 see topology Transcription factor E2F4 Homo sapiens
CATH 3.5 1cf7B00 1.10.10.10 82 see topology Transcription factor Dp-2 Homo sapiens
CATH 3.5 1cfaA00 1.20.91.20 71 see topology Complement C5 Homo sapiens
CATH 3.5 1cfeA00 3.40.33.10 135 see topology Pathogenesis-related leaf protein 6 Solanum lycopersicum
CATH 3.5 1cfrA00 3.40.91.10 283 see topology Type-2 restriction enzyme Cfr10I Citrobacter freundii
CATH 3.5 1cfzA00 3.40.50.1450 162 see topology Hydrogenase 2 maturation protease Escherichia coli
CATH 3.5 1cg5A00 1.10.490.10 141 see topology Hemoglobin subunit alpha Dasyatis akajei
CATH 3.5 1cg5B00 1.10.490.10 141 see topology Hemoglobin subunit beta Dasyatis akajei
CATH 3.5 1cgmE00 1.20.120.70 160 see topology Capsid protein Cucumber green mottle mosaic virus
CATH 3.5 1chcA00 3.30.40.10 68 see topology E3 ubiquitin-protein ligase ICP0 Equid alphaherpesvirus 1
CATH 3.5 1chdA00 3.40.50.180 198 see topology Chemotaxis response regulator protein-glutamate methylesterase Salmonella enterica
CATH 3.5 1chmA01 3.40.350.10 155 see topology Creatinase Pseudomonas putida
CATH 3.5 1chmA02 3.90.230.10 246 see topology Creatinase Pseudomonas putida
CATH 3.5 1ci4A00 1.10.150.40 87 see topology Barrier-to-autointegration factor Homo sapiens
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins