ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
CATH 3.5 1btkA00 2.30.29.30 160 see topology Tyrosine-protein kinase BTK Homo sapiens
CATH 3.5 1btnA00 2.30.29.30 106 see topology Spectrin beta chain, non-erythrocytic 1 Mus musculus
CATH 3.5 1bunB00 4.10.410.10 61 see topology Kunitz-type serine protease inhibitor homolog beta-bungarotoxin B2 chain Bungarus multicinctus
CATH 3.5 1bvyF00 3.40.50.360 152 see topology Bifunctional cytochrome P450/NADPH--P450 reductase Bacillus megaterium
CATH 3.5 1bw3A00 2.40.40.10 125 see topology Barwin Hordeum vulgare
CATH 3.5 1bwvS00 3.30.190.10 136 see topology Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit Galdieria partita
CATH 3.5 1bxdA00 3.30.565.10 161 see topology Osmolarity sensor protein EnvZ Escherichia coli
CATH 3.5 1bxyA00 3.30.1390.20 60 see topology 50S ribosomal protein L30 Thermus thermophilus
CATH 3.5 1by1A00 1.20.900.10 209 see topology Rho guanine nucleotide exchange factor 7 Homo sapiens
CATH 3.5 1byfA00 3.10.100.10 123 see topology Lectin Polyandrocarpa misakiensis
CATH 3.5 1byiA00 3.40.50.300 224 see topology ATP-dependent dethiobiotin synthetase BioD 1 Escherichia coli
CATH 3.5 1bymA00 2.30.30.90 97 see topology Diphtheria toxin repressor Corynebacterium diphtheriae
CATH 3.5 1byrA00 3.30.870.10 152 see topology Uncharacterized protein Salmonella enterica
CATH 3.5 1bywA00 3.30.450.20 110 see topology Potassium voltage-gated channel subfamily H member 2 Homo sapiens
CATH 3.5 1c01A00 2.60.20.30 76 see topology Antimicrobial peptide 1 Macadamia integrifolia
CATH 3.5 1c07A00 1.10.238.10 95 see topology Epidermal growth factor receptor substrate 15 Homo sapiens
CATH 3.5 1c17M00 1.20.120.220 142 see topology ATP synthase subunit a Escherichia coli
CATH 3.5 1c1yB00 3.10.20.90 77 see topology RAF proto-oncogene serine/threonine-protein kinase Homo sapiens
CATH 3.5 1c3kA00 2.100.10.30 143 see topology Lectin 1 Helianthus tuberosus
CATH 3.5 1c3pA00 3.40.800.20 372 see topology Acetoin utilization protein Aquifex aeolicus
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins