ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
CATH 3.5 1bcpF00 2.40.50.110 98 see topology Pertussis toxin subunit 5 Bordetella pertussis
CATH 3.5 1bd3A00 3.40.50.2020 224 see topology Uracil phosphoribosyltransferase Toxoplasma gondii
CATH 3.5 1bd8A00 1.25.40.20 156 see topology Cyclin-dependent kinase 4 inhibitor D Homo sapiens
CATH 3.5 1bdbA00 3.40.50.720 267 see topology Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase Pseudomonas sp.
CATH 3.5 1bdoA00 2.40.50.100 80 see topology Biotin carboxyl carrier protein of acetyl-CoA carboxylase Escherichia coli
CATH 3.5 1bdsA00 2.20.20.10 43 see topology DeltaKappa-actitoxin-Avd4a Anemonia sulcata
CATH 3.5 1beaA00 1.10.110.10 116 see topology Trypsin/factor XIIA inhibitor Zea mays
CATH 3.5 1bebA00 2.40.128.20 156 see topology Beta-lactoglobulin Bos taurus
CATH 3.5 1bev100 2.60.120.20 268 see topology Genome polyprotein Enterovirus E
CATH 3.5 1bf2A01 2.60.40.10 162 see topology Isoamylase Pseudomonas amyloderamosa
CATH 3.5 1bf6A00 3.20.20.140 291 see topology Phosphotriesterase homology protein Escherichia coli
CATH 3.5 1bgcA00 1.20.1250.10 158 see topology Granulocyte colony-stimulating factor Bos taurus
CATH 3.5 1bgfA00 1.10.532.10 124 see topology Signal transducer and activator of transcription 4 Mus musculus
CATH 3.5 1bh9B00 1.10.20.10 89 see topology Transcription initiation factor TFIID subunit 11 Homo sapiens
CATH 3.5 1bhaA00 1.10.287.170 67 see topology Bacteriorhodopsin Halobacterium salinarum
CATH 3.5 1bhdA00 1.10.418.10 108 see topology Utrophin Homo sapiens
CATH 3.5 1bheA00 2.160.20.10 376 see topology Endo-polygalacturonase Pectobacterium carotovorum
CATH 3.5 1bhuA00 2.60.20.30 102 see topology Metalloproteinase inhibitor Streptomyces nigrescens
CATH 3.5 1bi7B00 1.25.40.20 125 see topology Cyclin-dependent kinase inhibitor 2A Homo sapiens
CATH 3.5 1biaA03 2.30.30.100 47 see topology Bifunctional ligase/repressor BirA Escherichia coli
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins