ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
CATH 3.5 1azsB00 3.30.70.1230 189 see topology Adenylate cyclase type 2 Rattus norvegicus
CATH 3.5 1b0bA00 1.10.490.10 141 see topology Hemoglobin-1 Phacoides pectinatus
CATH 3.5 1b0uA00 3.40.50.300 258 see topology Histidine transport ATP-binding protein HisP Salmonella enterica
CATH 3.5 1b22A00 1.10.150.20 70 see topology DNA repair protein RAD51 homolog 1 Homo sapiens
CATH 3.5 1b2pA00 2.90.10.10 119 see topology Lectin SCAman Hyacinthoides hispanica
CATH 3.5 1b34A00 2.30.30.100 80 see topology Small nuclear ribonucleoprotein Sm D1 Homo sapiens
CATH 3.5 1b34B00 2.30.30.100 74 see topology Small nuclear ribonucleoprotein Sm D2 Homo sapiens
CATH 3.5 1b35A00 2.60.120.20 260 see topology Structural polyprotein Cricket paralysis virus
CATH 3.5 1b35B00 2.60.120.20 255 see topology Structural polyprotein Cricket paralysis virus
CATH 3.5 1b3aA00 2.40.50.40 67 see topology C-C motif chemokine 5 Homo sapiens
CATH 3.5 1b3oA00 3.20.20.70 307 see topology Inosine-5'-monophosphate dehydrogenase 2 Homo sapiens
CATH 3.5 1b3tA00 3.30.70.390 147 see topology Epstein-Barr nuclear antigen 1 Human gammaherpesvirus 4
CATH 3.5 1b3uA00 1.25.10.10 588 see topology Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform Homo sapiens
CATH 3.5 1b4bA00 3.30.1360.40 71 see topology Arginine repressor Geobacillus stearothermophilus
CATH 3.5 1b4fA00 1.10.150.50 74 see topology Ephrin type-B receptor 2 Homo sapiens
CATH 3.5 1b4rA00 2.60.40.10 80 see topology Polycystin-1 Homo sapiens
CATH 3.5 1b4uA00 1.10.700.10 132 see topology Protocatechuate 4,5-dioxygenase alpha chain Sphingomonas paucimobilis
CATH 3.5 1b4uB00 3.40.830.10 298 see topology Protocatechuate 4,5-dioxygenase beta chain Sphingomonas paucimobilis
CATH 3.5 1b5eA00 3.30.572.10 241 see topology Deoxycytidylate 5-hydroxymethyltransferase Enterobacteria phage T4 sensu lato
CATH 3.5 1b5lA00 1.20.1250.10 152 see topology Interferon tau-1 Komagataella pastoris
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins