ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
CATH 3.5 1atzB00 3.40.50.410 189 see topology von Willebrand factor Homo sapiens
CATH 3.5 1auiB00 1.10.238.10 165 see topology Calcineurin subunit B type 1 Homo sapiens
CATH 3.5 1auoA00 3.40.50.1820 218 see topology Carboxylesterase 2 Pseudomonas fluorescens
CATH 3.5 1auuA00 2.30.24.10 55 see topology Levansucrase and sucrase synthesis operon antiterminator Bacillus subtilis
CATH 3.5 1avbA00 2.60.120.200 226 see topology Arcelin-1 Phaseolus vulgaris
CATH 3.5 1avgI00 2.40.128.20 142 see topology Triabin Meccus pallidipennis
CATH 3.5 1avvA00 3.30.62.10 99 see topology Protein Nef Human immunodeficiency virus 1
CATH 3.5 1avwB00 2.80.10.50 171 see topology Trypsin inhibitor A Glycine max
CATH 3.5 1avyA00 1.20.5.320 68 see topology Fibritin Enterobacteria phage T4 sensu lato
CATH 3.5 1avyB00 1.20.5.320 54 see topology Fibritin Enterobacteria phage T4 sensu lato
CATH 3.5 1awcB00 1.25.40.20 153 see topology GA-binding protein subunit beta-1 Mus musculus
CATH 3.5 1awwA00 2.30.30.40 67 see topology Tyrosine-protein kinase BTK Homo sapiens
CATH 3.5 1ax8A00 1.20.1250.10 130 see topology Leptin Homo sapiens
CATH 3.5 1ayaA00 3.30.505.10 101 see topology Tyrosine-protein phosphatase non-receptor type 11 Mus musculus
CATH 3.5 1ayjA00 3.30.30.10 50 see topology Defensin-like protein 1 Raphanus sativus
CATH 3.5 1aym100 2.60.120.20 285 see topology Genome polyprotein Human rhinovirus sp.
CATH 3.5 1aym300 2.60.120.20 238 see topology Genome polyprotein Human rhinovirus sp.
CATH 3.5 1ayoA00 2.60.40.690 130 see topology Alpha-2-macroglobulin Bos taurus
CATH 3.5 1azoA00 3.40.600.10 212 see topology DNA mismatch repair protein MutH Escherichia coli
CATH 3.5 1azsA00 3.30.70.1230 190 see topology Adenylate cyclase type 5 Canis lupus
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins