ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
CATH 3.5 1akoA00 3.60.10.10 268 see topology Exodeoxyribonuclease III Escherichia coli
CATH 3.5 1akpA00 2.60.40.230 114 see topology Apokedarcidin actinomycete ATCC 53650
CATH 3.5 1aluA00 1.20.1250.10 157 see topology Interleukin-6 Homo sapiens
CATH 3.5 1alvA00 1.10.238.10 173 see topology Calpain small subunit 1 Sus scrofa
CATH 3.5 1alyA00 2.60.120.40 146 see topology CD40 ligand Homo sapiens
CATH 3.5 1am2A00 2.170.16.10 181 see topology DNA gyrase subunit A Mycobacterium xenopi
CATH 3.5 1am7A00 1.10.530.10 150 see topology Endolysin Escherichia virus Lambda
CATH 3.5 1amxA00 2.60.40.740 150 see topology Collagen adhesin Staphylococcus aureus
CATH 3.5 1aocA00 2.10.90.10 175 see topology Coagulogen Tachypleus tridentatus
CATH 3.5 1aoeA00 3.40.430.10 192 see topology Dihydrofolate reductase Candida albicans
CATH 3.5 1aohB00 2.60.40.680 147 see topology Cellulosomal-scaffolding protein A Ruminiclostridium thermocellum
CATH 3.5 1aolA00 3.90.310.10 228 see topology Envelope glycoprotein Murine leukemia virus
CATH 3.5 1aoyA00 1.10.10.10 78 see topology Arginine repressor Escherichia coli
CATH 3.5 1ap8A00 3.30.760.10 213 see topology Eukaryotic translation initiation factor 4E Saccharomyces cerevisiae
CATH 3.5 1apjA00 3.90.290.10 74 see topology Fibrillin-1 Homo sapiens
CATH 3.5 1aqcB00 2.30.29.30 115 see topology Amyloid beta A4 precursor protein-binding family A member 1 Homo sapiens
CATH 3.5 1aqzA00 3.10.450.30 142 see topology Ribonuclease mitogillin Aspergillus restrictus
CATH 3.5 1at0A00 2.170.16.10 142 see topology Protein hedgehog Drosophila melanogaster
CATH 3.5 1at3A00 3.20.16.10 217 see topology UL26 protease Human alphaherpesvirus 2
CATH 3.5 1atxA00 2.20.20.10 46 see topology Delta-actitoxin-Avd1a Anemonia sulcata
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins