ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
CATH 3.5 1aa0A00 1.20.5.320 113 see topology Fibritin Enterobacteria phage T4 sensu lato
CATH 3.5 1aapA00 4.10.410.10 56 see topology Amyloid beta A4 protein Homo sapiens
CATH 3.5 1abaA00 3.40.30.10 87 see topology Glutaredoxin Enterobacteria phage T4 sensu lato
CATH 3.5 1abvA00 1.10.520.20 105 see topology ATP synthase subunit delta Escherichia coli
CATH 3.5 1ac0A00 2.60.40.10 108 see topology Glucoamylase Aspergillus niger
CATH 3.5 1ac5A00 3.40.50.1820 483 see topology Pheromone-processing carboxypeptidase KEX1 Saccharomyces cerevisiae
CATH 3.5 1ad5A01 2.30.30.40 63 see topology Tyrosine-protein kinase HCK Homo sapiens
CATH 3.5 1adnA00 3.40.10.10 92 see topology Bifunctional transcriptional activator/DNA repair enzyme Ada Escherichia coli
CATH 3.5 1ae9A00 1.10.443.10 172 see topology Integrase Escherichia virus Lambda
CATH 3.5 1aepA00 1.20.120.20 153 see topology Apolipophorin-3b Locusta migratoria
CATH 3.5 1af6A00 2.40.170.10 421 see topology Maltoporin Escherichia coli
CATH 3.5 1afpA00 2.40.50.60 51 see topology Antifungal protein Aspergillus giganteus
CATH 3.5 1ah7A00 1.10.575.10 245 see topology Phospholipase C Bacillus cereus
CATH 3.5 1ahoA00 3.30.30.10 64 see topology Alpha-mammal toxin AaH2 Androctonus australis
CATH 3.5 1ahsA00 2.60.120.170 126 see topology Core protein VP7 African horse sickness virus
CATH 3.5 1aihA00 1.10.443.10 170 see topology Integrase Haemophilus phage HP1
CATH 3.5 1aiwA00 2.10.10.20 62 see topology Endoglucanase Z Dickeya dadantii
CATH 3.5 1ajkA00 2.60.120.200 212 see topology Beta-glucanase Paenibacillus macerans
CATH 3.5 1ajoB00 2.60.120.200 213 see topology Beta-glucanase Paenibacillus macerans
CATH 3.5 1ak0A00 1.10.575.10 264 see topology Nuclease P1 Penicillium citrinum
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins