ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3thia_ c.94.1.1 362 see topology u'Thiaminase-1' Bacillus subtilis
ASTRAL-1.75B d3thra_ c.66.1.5 286 see topology u'Glycine N-methyltransferase' Rattus norvegicus
ASTRAL-1.75B d3tlfa_ c.14.1.0 253 see topology u'Uncharacterized protein' Mycobacterium avium
ASTRAL-1.75B d3tm0a_ d.144.1.6 263 see topology u"Aminoglycoside 3'-phosphotransferase" Enterococcus faecalis
ASTRAL-1.75B d3tpaa_ c.94.1.0 507 see topology u'Heme-binding protein A' [Haemophilus] parasuis
ASTRAL-1.75B d3tpma_ a.118.1.1 422 see topology u'Importin subunit alpha-1' Mus musculus
ASTRAL-1.75B d3tqga_ a.103.1.0 350 see topology u'Citrate synthase' Coxiella burnetii
ASTRAL-1.75B d3tqla_ c.94.1.0 221 see topology u'Arginine-binding protein' Coxiella burnetii
ASTRAL-1.75B d3tqsa_ c.66.1.0 244 see topology u'Ribosomal RNA small subunit methyltransferase A' Coxiella burnetii
ASTRAL-1.75B d3tssa1 b.40.2.2 89 see topology u'Toxic shock syndrome toxin-1' Staphylococcus aureus
ASTRAL-1.75B d3tssa2 d.15.6.1 101 see topology u'Toxic shock syndrome toxin-1' Staphylococcus aureus
ASTRAL-1.75B d3tuia_ f.58.1.1 216 see topology u'D-methionine transport system permease protein MetI' Escherichia coli
ASTRAL-1.75B d3twra_ d.211.1.0 157 see topology u'Tankyrase-2' Homo sapiens
ASTRAL-1.75B d3twya_ b.7.1.2 137 see topology u'Protein kinase C alpha type' Rattus norvegicus
ASTRAL-1.75B d3ty4a_ c.77.1.0 356 see topology u'Homoisocitrate dehydrogenase' Schizosaccharomyces pombe
ASTRAL-1.75B d3tzla_ c.26.1.0 309 see topology u'Tryptophan--tRNA ligase' Campylobacter jejuni
ASTRAL-1.75B d3tzqa_ c.2.1.0 259 see topology u'Short-chain type dehydrogenase/reductase' Mycobacterium marinum
ASTRAL-1.75B d3tzta_ c.68.1.0 224 see topology u'Glycosyl transferase family 8' Anaerococcus prevotii
ASTRAL-1.75B d3u26a_ c.108.1.1 223 see topology u'Putative uncharacterized protein PH0459' Pyrococcus horikoshii
ASTRAL-1.75B d3u28b_ g.41.16.1 48 see topology u'H/ACA ribonucleoprotein complex subunit 3' Saccharomyces cerevisiae
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins