ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3swnb_ b.38.1.0 71 see topology u'U6 snRNA-associated Sm-like protein LSm6' Schizosaccharomyces pombe
ASTRAL-1.75B d3sxua_ c.128.1.1 146 see topology u'DNA polymerase III subunit chi' Escherichia coli
ASTRAL-1.75B d3szaa_ c.82.1.1 447 see topology u'Aldehyde dehydrogenase, dimeric NADP-preferring' Homo sapiens
ASTRAL-1.75B d3szya_ c.76.1.0 413 see topology u'Probable phosphonoacetate hydrolase' Sinorhizobium meliloti
ASTRAL-1.75B d3t0ha_ d.122.1.1 209 see topology u'Heat shock protein HSP 90-alpha' Homo sapiens
ASTRAL-1.75B d3t30a_ b.121.3.0 93 see topology u'Nucleoplasmin-2' Homo sapiens
ASTRAL-1.75B d3t3la_ d.82.2.1 121 see topology u'Frataxin, mitochondrial' Homo sapiens
ASTRAL-1.75B d3t4na_ d.129.6.2 139 see topology u'Carbon catabolite-derepressing protein kinase' Saccharomyces cerevisiae
ASTRAL-1.75B d3t5ga_ c.37.1.8 170 see topology u'GTP-binding protein Rheb' Homo sapiens
ASTRAL-1.75B d3t5gb_ b.1.18.8 147 see topology u"Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta" Homo sapiens
ASTRAL-1.75B d3t6ka_ c.23.1.0 120 see topology u'Response regulator receiver' Chloroflexus aurantiacus
ASTRAL-1.75B d3t74a_ d.92.1.2 316 see topology u'Thermolysin' Bacillus thermoproteolyticus
ASTRAL-1.75B d3t7ya_ d.367.1.0 94 see topology u'Yop proteins translocation protein U' Chlamydia trachomatis
ASTRAL-1.75B d3taob_ c.1.1.0 258 see topology u'Triosephosphate isomerase' Mycobacterium tuberculosis
ASTRAL-1.75B d3tcoa_ c.47.1.0 106 see topology u'Thioredoxin (TrxA-1)' Sulfolobus solfataricus
ASTRAL-1.75B d3tdta_ b.81.1.2 274 see topology u'2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase' Mycobacterium bovis
ASTRAL-1.75B d3tema_ c.23.5.3 228 see topology u'Ribosyldihydronicotinamide dehydrogenase [quinone]' Homo sapiens
ASTRAL-1.75B d3tewa_ f.11.1.1 701 see topology u'Protective antigen' Bacillus anthracis
ASTRAL-1.75B d3tg0a_ c.76.1.1 440 see topology u'Alkaline phosphatase' Escherichia coli
ASTRAL-1.75B d3tgla_ c.69.1.17 265 see topology u'Lipase' Rhizomucor miehei
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins