ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3s6jd_ c.108.1.0 212 see topology u'Hydrolase, haloacid dehalogenase-like family' Pseudomonas syringae group genomosp. 3
ASTRAL-1.75B d3s6ma_ b.62.1.1 163 see topology u'Peptidyl-prolyl cis-trans isomerase' Burkholderia pseudomallei
ASTRAL-1.75B d3s8qa_ a.35.1.0 76 see topology u'Regulatory protein' Enterobacter sp. RFL1396
ASTRAL-1.75B d3saoa_ b.60.1.1 150 see topology u'Extracellular fatty acid-binding protein' Gallus gallus
ASTRAL-1.75B d3sbta_ c.55.3.14 253 see topology u'Pre-mRNA-splicing factor 8' Saccharomyces cerevisiae
ASTRAL-1.75B d3sdoa_ c.1.16.0 443 see topology u'Nitrilotriacetate monooxygenase' Burkholderia pseudomallei
ASTRAL-1.75B d3seba1 b.40.2.2 121 see topology u'Enterotoxin type B' Staphylococcus aureus
ASTRAL-1.75B d3seba2 d.15.6.1 117 see topology u'Enterotoxin type B' Staphylococcus aureus
ASTRAL-1.75B d3sfpa_ d.157.1.0 231 see topology u'Beta-lactamase NDM-1' Klebsiella pneumoniae
ASTRAL-1.75B d3sgha_ a.118.8.0 469 see topology u'SusD homolog' Bacteroides thetaiotaomicron
ASTRAL-1.75B d3shua_ b.36.1.0 94 see topology u'Tight junction protein ZO-1' Homo sapiens
ASTRAL-1.75B d3si7a_ c.37.1.12 265 see topology u'Cystic fibrosis transmembrane conductance regulator' Mus musculus
ASTRAL-1.75B d3sila_ b.68.1.1 379 see topology u'Sialidase' Salmonella enterica
ASTRAL-1.75B d3sj3a_ c.1.2.3 220 see topology u"Orotidine 5'-phosphate decarboxylase" Methanothermobacter thermautotrophicus
ASTRAL-1.75B d3sj5a_ d.278.1.1 185 see topology u'Methyl-accepting chemotaxis protein' Caldanaerobacter subterraneus
ASTRAL-1.75B d3snfa_ d.5.1.1 103 see topology u'Protein P-30' Rana pipiens
ASTRAL-1.75B d3snya_ b.11.1.0 87 see topology u'Beta and gamma crystallin' Clostridium beijerinckii
ASTRAL-1.75B d3soga_ a.238.1.0 197 see topology u'Amphiphysin' Homo sapiens
ASTRAL-1.75B d3sqfa_ b.50.1.1 95 see topology u'Protease' Mason-Pfizer monkey virus
ASTRAL-1.75B d3ss1a_ c.68.1.0 537 see topology u'Toxin A' Clostridioides difficile
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins