ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3rk1a_ c.26.2.1 216 see topology u'N-type ATP pyrophosphatase superfamily' Pyrococcus furiosus
ASTRAL-1.75B d3rlfg_ f.58.1.1 286 see topology u'Maltose transport system permease protein MalG' Escherichia coli
ASTRAL-1.75B d3rmua_ d.32.1.0 134 see topology u'Methylmalonyl-CoA epimerase, mitochondrial' Homo sapiens
ASTRAL-1.75B d3rnda_ c.1.4.1 399 see topology u'NADPH dehydrogenase 1' Saccharomyces pastorianus
ASTRAL-1.75B d3rnja_ b.34.2.1 67 see topology u'Brain-specific angiogenesis inhibitor 1-associated protein 2' Homo sapiens
ASTRAL-1.75B d3rnqa_ b.1.1.1 112 see topology u'Programmed cell death protein 1' Mus musculus
ASTRAL-1.75B d3ro5a_ e.75.1.1 430 see topology u'Nucleoprotein' Influenza A virus
ASTRAL-1.75B d3rqva_ b.121.7.1 184 see topology — —
ASTRAL-1.75B d3rqza_ d.159.1.0 239 see topology u'Metallophosphoesterase' Sphaerobacter thermophilus
ASTRAL-1.75B d3rrca_ a.264.1.1 276 see topology u'Duffy receptor' Plasmodium vivax
ASTRAL-1.75B d3rwba_ c.2.1.0 247 see topology u'Pyridoxal 4-dehydrogenase' Mesorhizobium loti
ASTRAL-1.75B d3ryce_ a.137.10.1 136 see topology u'Stathmin-4' Rattus norvegicus
ASTRAL-1.75B d3rysa_ c.1.9.0 335 see topology u'Adenine deaminase' Paenarthrobacter aurescens
ASTRAL-1.75B d3rzia_ c.1.10.8 453 see topology u'Phospho-2-dehydro-3-deoxyheptonate aldolase AroG' Mycobacterium tuberculosis
ASTRAL-1.75B d3s1wa_ c.1.10.1 223 see topology u'Probable transaldolase' Thermoplasma acidophilum
ASTRAL-1.75B d3s26a_ b.60.1.1 169 see topology u'Neutrophil gelatinase-associated lipocalin' Mus musculus
ASTRAL-1.75B d3s3ta_ c.26.2.0 144 see topology u'Universal stress protein' Lactobacillus plantarum
ASTRAL-1.75B d3s4ka_ d.38.1.0 124 see topology u'Putative esterase Rv1847' Mycobacterium tuberculosis
ASTRAL-1.75B d3s52a_ d.177.1.1 211 see topology u'Putative isomerase' Yersinia pestis
ASTRAL-1.75B d3s5oa_ c.1.10.0 295 see topology u'4-hydroxy-2-oxoglutarate aldolase, mitochondrial' Homo sapiens
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins