ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3qjga_ c.34.1.0 171 see topology u'Epidermin biosynthesis protein EpiD' Staphylococcus aureus
ASTRAL-1.75B d3qk8a_ c.14.1.0 259 see topology u'Enoyl-CoA hydratase EchA15' Mycobacterium marinum
ASTRAL-1.75B d3qmxa_ c.47.1.0 99 see topology u'Probable glutaredoxin ssr2061' Synechocystis sp. PCC 6803
ASTRAL-1.75B d3qnma_ c.108.1.0 226 see topology u'Haloacid dehalogenase-like hydrolase' Bacteroides thetaiotaomicron
ASTRAL-1.75B d3qoma_ c.1.8.0 466 see topology u'6-phospho-beta-glucosidase' Lactobacillus plantarum
ASTRAL-1.75B d3qq8b_ d.15.1.2 80 see topology u'FAS-associated factor 1' Homo sapiens
ASTRAL-1.75B d3qraa_ f.4.1.0 152 see topology u'Outer membrane protein X' Yersinia pestis
ASTRAL-1.75B d3qsda_ d.3.1.0 253 see topology u'Cathepsin B1 isotype 1' Schistosoma mansoni
ASTRAL-1.75B d3qu3a_ a.4.5.0 122 see topology u'Interferon regulatory factor 7' Mus musculus
ASTRAL-1.75B d3qwoc_ a.8.1.1 53 see topology — —
ASTRAL-1.75B d3qxza_ c.14.1.0 259 see topology u'Probable enoyl-CoA hydratase/isomerase' Mycobacterium abscessus
ASTRAL-1.75B d3qy1a_ c.53.2.1 215 see topology u'Carbonic anhydrase' Salmonella enterica
ASTRAL-1.75B d3qy3a1 d.38.1.1 129 see topology u'Uncharacterized protein' Pseudomonas aeruginosa
ASTRAL-1.75B d3qz6a_ c.1.12.0 252 see topology u'HpcH/HpaI aldolase' Desulfitobacterium hafniense
ASTRAL-1.75B d3qzba_ b.1.13.0 132 see topology u'Putative superoxide reductase' Thermotoga maritima
ASTRAL-1.75B d3qzma_ b.1.28.1 124 see topology u'Iron-regulated surface determinant protein A' Staphylococcus aureus
ASTRAL-1.75B d3qzra_ b.47.1.0 180 see topology u'3C protein' Enterovirus A
ASTRAL-1.75B d3r03a_ d.113.1.0 129 see topology u'NUDIX hydrolase' Rhodospirillum rubrum
ASTRAL-1.75B d3r04a_ d.144.1.7 271 see topology u'Serine/threonine-protein kinase pim-1' Homo sapiens
ASTRAL-1.75B d3r0sa_ b.81.1.0 249 see topology u'Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase' Campylobacter jejuni
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins