ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3piua_ c.67.1.4 408 see topology u'1-aminocyclopropane-1-carboxylate synthase' Malus domestica
ASTRAL-1.75B d3pk0a_ c.2.1.0 260 see topology u'Short-chain dehydrogenase/reductase SDR' Mycobacterium smegmatis
ASTRAL-1.75B d3pl1a_ c.33.1.0 185 see topology u'Pyrazinamidase/nicotinamidase PncA' Mycobacterium tuberculosis
ASTRAL-1.75B d3pl2a_ c.72.1.0 306 see topology u'Sugar kinases, ribokinase family' Corynebacterium glutamicum
ASTRAL-1.75B d3plza_ a.123.1.1 231 see topology u'Nuclear receptor subfamily 5 group A member 2' Homo sapiens
ASTRAL-1.75B d3pmga1 c.84.1.1 189 see topology u'Phosphoglucomutase-1' Oryctolagus cuniculus
ASTRAL-1.75B d3pmga2 c.84.1.1 113 see topology u'Phosphoglucomutase-1' Oryctolagus cuniculus
ASTRAL-1.75B d3pmga3 c.84.1.1 117 see topology u'Phosphoglucomutase-1' Oryctolagus cuniculus
ASTRAL-1.75B d3pmga4 d.129.2.1 141 see topology u'Phosphoglucomutase-1' Oryctolagus cuniculus
ASTRAL-1.75B d3pmta_ b.34.9.1 55 see topology u'Tudor domain-containing protein 3' Homo sapiens
ASTRAL-1.75B d3pnlb_ a.208.1.0 211 see topology u'PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL' Escherichia coli
ASTRAL-1.75B d3pnza_ c.1.9.0 328 see topology u'Phosphotriesterase family protein' Listeria monocytogenes
ASTRAL-1.75B d3po8a_ b.26.1.0 98 see topology u'FHA domain-containing protein FhaA' Mycobacterium tuberculosis
ASTRAL-1.75B d3poza_ d.144.1.7 293 see topology u'Epidermal growth factor receptor' Homo sapiens
ASTRAL-1.75B d3pr1a_ c.37.1.0 172 see topology u'Probable GTP-binding protein EngB' Thermotoga maritima
ASTRAL-1.75B d3pr9a_ d.26.1.0 150 see topology u'Putative FKBP-type peptidyl-prolyl cis-trans isomerase MJ0825' Methanocaldococcus jannaschii
ASTRAL-1.75B d3prna_ f.4.3.1 289 see topology u'Porin' Rhodobacter blasticus
ASTRAL-1.75B d3proc1 d.52.1.1 80 see topology u'Alpha-lytic protease' Lysobacter enzymogenes
ASTRAL-1.75B d3proc2 d.52.1.1 70 see topology u'Alpha-lytic protease' Lysobacter enzymogenes
ASTRAL-1.75B d3prta_ c.56.5.2 323 see topology u'Carboxypeptidase T' Thermoactinomyces vulgaris
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins