ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3obqa_ d.20.1.2 141 see topology u'Tumor susceptibility gene 101 protein' Homo sapiens
ASTRAL-1.75B d3oc7a_ c.14.1.0 251 see topology u'Enoyl-CoA hydratase' Mycobacterium avium
ASTRAL-1.75B d3oe2a_ d.26.1.0 133 see topology — —
ASTRAL-1.75B d3oeqa_ d.82.2.1 121 see topology u'Frataxin homolog, mitochondrial' Saccharomyces cerevisiae
ASTRAL-1.75B d3oexa_ c.1.10.1 251 see topology u'3-dehydroquinate dehydratase' Salmonella enterica
ASTRAL-1.75B d3of4a_ d.90.1.0 205 see topology u'Nitroreductase' Idiomarina loihiensis
ASTRAL-1.75B d3og7a_ d.144.1.7 247 see topology u'Serine/threonine-protein kinase B-raf' Homo sapiens
ASTRAL-1.75B d3og9a_ c.69.1.0 206 see topology u'Uncharacterized protein' Lactococcus lactis
ASTRAL-1.75B d3ohua_ d.42.1.0 125 see topology u'Transcription regulator protein BACH2' Homo sapiens
ASTRAL-1.75B d3oiga_ c.2.1.2 260 see topology u'Enoyl-[acyl-carrier-protein] reductase [NADH] FabI' Bacillus subtilis
ASTRAL-1.75B d3ojga_ c.1.9.0 322 see topology u'Phosphotriesterase' Geobacillus kaustophilus
ASTRAL-1.75B d3olla_ a.123.1.1 234 see topology u'Estrogen receptor beta' Homo sapiens
ASTRAL-1.75B d3om8a_ c.69.1.0 260 see topology u'Probable hydrolase' Pseudomonas aeruginosa
ASTRAL-1.75B d3oo3a_ a.104.1.0 371 see topology u'P450 monooxygenase' Actinoplanes teichomyceticus
ASTRAL-1.75B d3op8a_ g.18.1.1 85 see topology u'Beta-2-glycoprotein 1' Homo sapiens
ASTRAL-1.75B d3oq3a_ a.26.1.3 166 see topology u'Interferon alpha-5' Mus musculus
ASTRAL-1.75B d3or5a_ c.47.1.0 140 see topology u'Thiol Chlorobaculum tepidum
ASTRAL-1.75B d3orha_ c.66.1.16 230 see topology u'Guanidinoacetate N-methyltransferase' Homo sapiens
ASTRAL-1.75B d3osea_ d.129.6.1 100 see topology u'Serine/threonine-protein kinase MARK1' Homo sapiens
ASTRAL-1.75B d3oska_ b.1.1.1 121 see topology u'Cytotoxic T-lymphocyte protein 4' Homo sapiens
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins