ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3nxba_ a.29.2.0 101 see topology u'Cat eye syndrome critical region protein 2' Homo sapiens
ASTRAL-1.75B d3nxua_ a.104.1.1 457 see topology u'Cytochrome P450 3A4' Homo sapiens
ASTRAL-1.75B d3nyia_ c.119.1.0 285 see topology u'EDD domain protein, DegV family' Eubacterium ventriosum
ASTRAL-1.75B d3nz1a_ c.1.2.4 249 see topology u'Indole-3-glycerol phosphate synthase' Sulfolobus solfataricus
ASTRAL-1.75B d3nzbx_ c.71.1.1 206 see topology u'Dihydrofolate reductase' Pneumocystis carinii
ASTRAL-1.75B d3nzea_ c.124.1.0 249 see topology u'Putative transcriptional regulator, sugar-binding family' Paenarthrobacter aurescens
ASTRAL-1.75B d3o0da_ c.69.1.0 301 see topology u'Triacylglycerol lipase' Yarrowia lipolytica
ASTRAL-1.75B d3o0gd_ a.74.1.1 149 see topology u'Cyclin-dependent kinase 5 activator 1' Homo sapiens
ASTRAL-1.75B d3o1ca_ d.13.1.1 115 see topology u'Histidine triad nucleotide-binding protein 1' Oryctolagus cuniculus
ASTRAL-1.75B d3o26a_ c.2.1.0 294 see topology u'Salutaridine reductase' Papaver somniferum
ASTRAL-1.75B d3o46a_ b.36.1.0 83 see topology u'MAGUK p55 subfamily member 7' Homo sapiens
ASTRAL-1.75B d3o5ta_ a.209.1.0 295 see topology u'Dinitrogenase reductase activacting glicohydrolase' Azospirillum brasilense
ASTRAL-1.75B d3o69a_ d.113.1.1 176 see topology u'GDP-mannose pyrophosphatase NudK' Escherichia coli
ASTRAL-1.75B d3o6ca_ c.1.24.0 256 see topology u"Pyridoxine 5'-phosphate synthase" Campylobacter jejuni
ASTRAL-1.75B d3o79a_ d.6.1.1 97 see topology u'Major prion protein' Oryctolagus cuniculus
ASTRAL-1.75B d3o7ma_ c.61.1.0 166 see topology u'Hypoxanthine phosphoribosyltransferase' Bacillus anthracis
ASTRAL-1.75B d3o83a_ e.23.1.0 433 see topology u'Peptide arylation enzyme' Acinetobacter baumannii
ASTRAL-1.75B d3oaed_ b.121.6.1 421 see topology u'Major capsid protein L1' Human papillomavirus
ASTRAL-1.75B d3obba1 a.100.1.1 127 see topology u'NAD-dependent L-serine dehydrogenase' Pseudomonas aeruginosa
ASTRAL-1.75B d3obca_ a.204.1.0 106 see topology — —
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins