ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3ncla_ b.47.1.2 241 see topology u'Suppressor of tumorigenicity 14 protein' Homo sapiens
ASTRAL-1.75B d3neda_ d.22.1.1 228 see topology u'PAmCherry1 protein' Discosoma sp.
ASTRAL-1.75B d3nera_ d.120.1.1 90 see topology u'Cytochrome b5 type B' Homo sapiens
ASTRAL-1.75B d3nfka_ b.36.1.1 92 see topology u'Tyrosine-protein phosphatase non-receptor type 4' Homo sapiens
ASTRAL-1.75B d3ngha_ b.36.1.0 106 see topology u'Na(+)/H(+) exchange regulatory cofactor NHE-RF3' Mus musculus
ASTRAL-1.75B d3nhea_ d.3.1.9 337 see topology u'Ubiquitin carboxyl-terminal hydrolase 2' Homo sapiens
ASTRAL-1.75B d3ni6a_ d.26.1.0 124 see topology u'70 kDa peptidylprolyl isomerase, putative' Plasmodium vivax
ASTRAL-1.75B d3niaa_ e.3.1.0 267 see topology u'Beta-lactamase' Pseudomonas aeruginosa
ASTRAL-1.75B d3nioa_ c.42.1.0 309 see topology u'Guanidinobutyrase' Pseudomonas aeruginosa
ASTRAL-1.75B d3nira_ g.13.1.1 48 see topology u'Crambin' Crambe hispanica
ASTRAL-1.75B d3niwa_ c.108.1.0 258 see topology u'Haloacid dehalogenase-like hydrolase' Bacteroides thetaiotaomicron
ASTRAL-1.75B d3nm6b_ c.56.2.0 229 see topology u'Aminodeoxyfutalosine nucleosidase' Helicobacter pylori
ASTRAL-1.75B d3no3a_ c.1.18.0 230 see topology u'Putative glycerophosphodiester phosphodiesterase' Parabacteroides distasonis
ASTRAL-1.75B d3no6a_ a.132.1.0 224 see topology u'Aminopyrimidine aminohydrolase' Staphylococcus epidermidis
ASTRAL-1.75B d3nsza_ d.144.1.7 327 see topology u'Casein kinase II subunit alpha' Homo sapiens
ASTRAL-1.75B d3ntxa_ c.88.1.1 322 see topology u'L-asparaginase I' Yersinia pestis
ASTRAL-1.75B d3nuaa_ d.143.1.0 236 see topology u'Phosphoribosylaminoimidazole-succinocarboxamide synthase' Clostridium perfringens
ASTRAL-1.75B d3nula_ d.110.1.1 127 see topology u'Profilin-1' Arabidopsis thaliana
ASTRAL-1.75B d3nx6a_ b.35.1.0 75 see topology u'10 kDa chaperonin' Xanthomonas oryzae
ASTRAL-1.75B d3nxaa_ a.39.1.0 100 see topology u'Protein S100-A16' Homo sapiens
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins