ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
Residue >=
Residue <=
Molecule: [Protein molecule containing the word as query]
Source: [Source organism of protein ]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3mxta_ c.26.1.0 272 see topology u'Pantothenate synthetase' Campylobacter jejuni
ASTRAL-1.75B d3n08a_ b.17.1.0 151 see topology u'UPF0098 protein CT_736' Chlamydia trachomatis
ASTRAL-1.75B d3n10a_ d.63.1.0 176 see topology u'Putative adenylate cyclase' Yersinia pestis
ASTRAL-1.75B d3n1ca_ c.72.1.0 309 see topology u'ATP-dependent 6-phosphofructokinase isozyme 2' Escherichia coli
ASTRAL-1.75B d3n1fa_ d.65.1.2 151 see topology u'Indian hedgehog protein' Homo sapiens
ASTRAL-1.75B d3n1fc_ b.1.2.1 94 see topology u'Cell adhesion molecule-related/down-regulated by oncogenes' Homo sapiens
ASTRAL-1.75B d3n2ta_ c.1.7.0 327 see topology u'Putative oxidoreductase' Gluconobacter oxydans
ASTRAL-1.75B d3n2wa_ d.154.1.0 367 see topology u'Beta-peptidyl aminopeptidase BapA' Sphingosinicella xenopeptidilytica
ASTRAL-1.75B d3n3ma_ c.1.2.3 328 see topology u"Orotidine 5'-phosphate decarboxylase" Plasmodium falciparum
ASTRAL-1.75B d3n4ib_ d.98.1.1 165 see topology u'Beta-lactamase inhibitory protein' Streptomyces clavuligerus
ASTRAL-1.75B d3n4ja_ c.116.1.1 161 see topology u"tRNA (cytidine(34)-2'-O)-methyltransferase" Yersinia pestis
ASTRAL-1.75B d3n53a_ c.23.1.0 116 see topology u'Response receiver sensor diguanylate cyclase, GAF domain-containing' Pelobacter carbinolicus
ASTRAL-1.75B d3n55.1 b.6.1.7 117 see topology
ASTRAL-1.75B d3n5wa_ d.174.1.1 407 see topology u'Nitric oxide synthase, brain' Rattus norvegicus
ASTRAL-1.75B d3n6qa_ c.1.7.0 314 see topology u'L-glyceraldehyde 3-phosphate reductase' Escherichia coli
ASTRAL-1.75B d3n74d_ c.2.1.0 227 see topology u'DNA gyrase, subunit B Brucella abortus
ASTRAL-1.75B d3n7oa_ b.47.1.2 216 see topology u'Chymase' Homo sapiens
ASTRAL-1.75B d3n8ia_ c.44.1.1 154 see topology u'Low molecular weight phosphotyrosine protein phosphatase' Homo sapiens
ASTRAL-1.75B d3n9ka_ c.1.8.3 394 see topology u'Glucan 1,3-beta-glucosidase' Candida albicans
ASTRAL-1.75B d3n9ra_ c.1.10.0 297 see topology u'Fructose-bisphosphate aldolase' Helicobacter pylori

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins