ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3l7wa_ a.4.5.0 104 see topology u'Uncharacterized protein' Streptococcus mutans
ASTRAL-1.75B d3l8ra_ a.7.2.0 102 see topology u'Putative PTS system, cellobiose-specific IIA component' Streptococcus mutans
ASTRAL-1.75B d3l8ua_ c.116.1.0 154 see topology u"Putative tRNA (cytidine(34)-2'-O)-methyltransferase" Streptococcus mutans
ASTRAL-1.75B d3l9jc_ d.169.1.1 130 see topology u'Tetranectin' Homo sapiens
ASTRAL-1.75B d3l9sa_ c.47.1.13 185 see topology u'Thiol Salmonella enterica
ASTRAL-1.75B d3l9va_ c.47.1.0 175 see topology u'Thiol Salmonella enterica
ASTRAL-1.75B d3lada2 c.3.1.5 119 see topology u'Dihydrolipoyl dehydrogenase' Azotobacter vinelandii
ASTRAL-1.75B d3laea_ d.145.1.4 78 see topology u'UPF0053 protein HI_0107' Haemophilus influenzae
ASTRAL-1.75B d3lasa_ c.53.2.0 166 see topology u'Carbonic anhydrase' Streptococcus mutans
ASTRAL-1.75B d3lb2a_ a.1.1.2 137 see topology u'Dehaloperoxidase A' Amphitrite ornata
ASTRAL-1.75B d3ldqb_ a.7.7.1 111 see topology u'BAG family molecular chaperone regulator 1' Homo sapiens
ASTRAL-1.75B d3ldza_ a.118.9.0 140 see topology u'Signal transducing adapter molecule 1' Homo sapiens
ASTRAL-1.75B d3le0a_ b.18.1.0 142 see topology u'Platelet aggregation factor Sm-hPAF' Streptococcus mitis
ASTRAL-1.75B d3le2a_ e.1.1.0 393 see topology u'Serpin-ZX' Arabidopsis thaliana
ASTRAL-1.75B d3lf6a_ d.112.1.1 154 see topology — —
ASTRAL-1.75B d3lfha_ c.54.1.0 129 see topology u'Phosphotransferase system, mannose/fructose-specific component IIA' Caldanaerobacter subterraneus
ASTRAL-1.75B d3lg3a_ c.1.12.7 409 see topology u'Isocitrate lyase' Yersinia pestis
ASTRAL-1.75B d3lhea_ d.190.1.0 120 see topology u'Transcriptional regulator, GntR family' Bacillus anthracis
ASTRAL-1.75B d3lhra_ a.28.3.0 92 see topology u'Zinc finger protein 24' Homo sapiens
ASTRAL-1.75B d3liza_ b.50.1.0 319 see topology u'Aspartic protease Bla g 2' Blattella germanica
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins