ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3klra_ b.84.1.0 125 see topology u'Glycine cleavage system H protein, mitochondrial' Bos taurus
ASTRAL-1.75B d3kmaa_ b.85.7.2 105 see topology u'Histone H3K27 methylase' Paramecium bursaria Chlorella virus 1
ASTRAL-1.75B d3ko8a_ c.2.1.0 297 see topology u'NAD-dependent epimerase/dehydratase' Pyrobaculum calidifontis
ASTRAL-1.75B d3kpba_ d.37.1.0 119 see topology u'Uncharacterized protein MJ0100' Methanocaldococcus jannaschii
ASTRAL-1.75B d3kqia_ g.50.1.2 71 see topology u'Lysine-specific demethylase PHF2' Homo sapiens
ASTRAL-1.75B d3kqra_ b.29.1.5 204 see topology u'Serum amyloid P-component' Homo sapiens
ASTRAL-1.75B d3kqsa_ c.66.1.15 257 see topology u'Phenylethanolamine N-methyltransferase' Homo sapiens
ASTRAL-1.75B d3krra_ d.144.1.0 291 see topology u'Tyrosine-protein kinase JAK2' Homo sapiens
ASTRAL-1.75B d3krua_ c.1.4.0 335 see topology u'NADH Thermoanaerobacter pseudethanolicus
ASTRAL-1.75B d3ks9a_ c.93.1.1 445 see topology u'Metabotropic glutamate receptor 1' Homo sapiens
ASTRAL-1.75B d3ksna_ b.125.1.1 177 see topology u'Outer-membrane lipoprotein carrier protein' Escherichia coli
ASTRAL-1.75B d3ksva_ d.13.1.0 141 see topology u'Uncharacterized protein' Leishmania major
ASTRAL-1.75B d3kt9a_ b.26.1.0 102 see topology u'Aprataxin' Homo sapiens
ASTRAL-1.75B d3ktoa_ c.23.1.0 118 see topology u'Response regulator receiver protein' Pseudoalteromonas atlantica
ASTRAL-1.75B d3ktza_ d.165.1.0 251 see topology u'Ribosome-inactivating protein gelonin' Suregada multiflora
ASTRAL-1.75B d3ku3a_ b.19.1.2 317 see topology u'Hemagglutinin' Influenza A virus
ASTRAL-1.75B d3kucb_ d.15.1.5 76 see topology u'RAF proto-oncogene serine/threonine-protein kinase' Homo sapiens
ASTRAL-1.75B d3kv1a_ c.124.1.0 244 see topology u'Transcriptional repressor' Aliivibrio fischeri
ASTRAL-1.75B d3kvqa_ b.1.1.0 82 see topology u'Vascular endothelial growth factor receptor 2' Homo sapiens
ASTRAL-1.75B d3kvta_ d.42.1.2 103 see topology u'Shaw potassium channel Kv3.1a' Aplysia californica
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins