ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3k4ua_ c.94.1.0 227 see topology u'BINDING COMPONENT OF ABC TRANSPORTER' Wolinella succinogenes
ASTRAL-1.75B d3k67a_ d.38.1.4 156 see topology u'Uncharacterized protein' Archaeoglobus fulgidus
ASTRAL-1.75B d3k69a_ a.4.5.0 147 see topology u'Putative transcription regulator' Lactobacillus plantarum
ASTRAL-1.75B d3k6ca_ a.25.1.5 89 see topology u'Uncharacterized protein' Nitrosomonas europaea
ASTRAL-1.75B d3k6ea_ d.37.1.0 139 see topology u"Inosine-5'-monophosphate dehydrogenase" Streptococcus pneumoniae
ASTRAL-1.75B d3k6ra_ c.66.1.47 255 see topology u'tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase' Pyrococcus horikoshii
ASTRAL-1.75B d3k77a_ b.18.1.8 152 see topology u'DNA repair protein XRCC1' Homo sapiens
ASTRAL-1.75B d3k7pa_ c.121.1.0 153 see topology u'Ribose 5-phosphate isomerase, putative' Trypanosoma cruzi
ASTRAL-1.75B d3k7ya_ c.67.1.0 405 see topology u'Aspartate aminotransferase' Plasmodium falciparum
ASTRAL-1.75B d3kana_ d.80.1.3 117 see topology u'D-dopachrome decarboxylase' Homo sapiens
ASTRAL-1.75B d3kb2a_ c.37.1.1 170 see topology u'SPBc2 prophage-derived uncharacterized protein YorR' Bacillus subtilis
ASTRAL-1.75B d3kcgi_ e.1.1.1 419 see topology u'Antithrombin-III' Homo sapiens
ASTRAL-1.75B d3kdfa_ b.40.4.3 110 see topology u'Replication protein A 14 kDa subunit' Homo sapiens
ASTRAL-1.75B d3kdfb_ b.40.4.3 113 see topology u'Replication protein A 32 kDa subunit' Homo sapiens
ASTRAL-1.75B d3kfaa_ d.144.1.7 284 see topology u'Tyrosine-protein kinase ABL1' Mus musculus
ASTRAL-1.75B d3kffa_ b.60.1.1 152 see topology u'Major urinary protein 4' Mus musculus
ASTRAL-1.75B d3khta_ c.23.1.0 130 see topology u'Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain' Hahella chejuensis
ASTRAL-1.75B d3ki3a_ d.166.1.0 198 see topology u'Cholix toxin' Vibrio cholerae
ASTRAL-1.75B d3kjta_ c.94.1.1 370 see topology u'Maltose-binding periplasmic protein' Escherichia coli
ASTRAL-1.75B d3kl2a_ c.33.1.0 203 see topology u'Putative isochorismatase' Streptomyces avermitilis
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins