ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Molecule: [Protein molecule containing the word as query]
Source: [Source organism of protein ]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3ijta_ d.129.3.9 140 see topology u'Uncharacterized protein' Streptococcus mutans
ASTRAL-1.75B d3ijwa_ c.140.1.0 256 see topology u'Aminoglycoside N3-acetyltransferase' Bacillus anthracis
ASTRAL-1.75B d3ilwa_ e.11.1.0 464 see topology u'DNA gyrase subunit A' Mycobacterium tuberculosis
ASTRAL-1.75B d3ilza_ a.123.1.1 263 see topology u'Thyroid hormone receptor alpha' Homo sapiens
ASTRAL-1.75B d3im3a_ a.31.1.1 50 see topology u'cAMP-dependent protein kinase type I-alpha regulatory subunit' Bos taurus
ASTRAL-1.75B d3imab_ d.17.1.0 84 see topology u'Cysteine proteinase inhibitor' Colocasia esculenta
ASTRAL-1.75B d3imia_ d.13.1.1 142 see topology u'Protein hit' Bacillus anthracis
ASTRAL-1.75B d3iofa_ d.157.1.1 227 see topology u'Beta-lactamase' Aeromonas hydrophila
ASTRAL-1.75B d3ip0a_ d.58.30.1 158 see topology u'2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase' Escherichia coli
ASTRAL-1.75B d3ip4c_ a.137.12.1 92 see topology u'Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C' Staphylococcus aureus
ASTRAL-1.75B d3ipra_ c.54.1.0 137 see topology u'PTS system, IIA component' Enterococcus faecalis
ASTRAL-1.75B d3iq0a_ c.72.1.0 299 see topology u'Uncharacterized protein' Escherichia coli
ASTRAL-1.75B d3iqca_ a.24.19.0 119 see topology u'Flagellar protein FliS' Helicobacter pylori
ASTRAL-1.75B d3iqla_ b.34.2.0 66 see topology u'Endophilin-A1' Rattus norvegicus
ASTRAL-1.75B d3iqua_ a.118.7.1 235 see topology u'14-3-3 protein sigma' Homo sapiens
ASTRAL-1.75B d3irba_ b.40.4.15 136 see topology u'Uncharacterized protein' Sulfolobus solfataricus
ASTRAL-1.75B d3irua_ c.108.1.0 268 see topology u'Phosphonoacetaldehyde hydrolase' Oleispira antarctica
ASTRAL-1.75B d3isga_ e.3.1.1 248 see topology u'Beta-lactamase OXA-1' Escherichia coli
ASTRAL-1.75B d3ivra_ e.23.1.0 394 see topology u'Putative long-chain-fatty-acid CoA ligase' Rhodopseudomonas palustris
ASTRAL-1.75B d3ivva_ b.8.1.1 140 see topology u'Speckle-type POZ protein' Homo sapiens

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins