ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3i4fa_ c.2.1.0 242 see topology u'3-oxoacyl-[acyl-carrier protein] reductase' Bacillus thuringiensis
ASTRAL-1.75B d3i4oa_ b.40.4.5 68 see topology u'Translation initiation factor IF-1' Mycobacterium tuberculosis
ASTRAL-1.75B d3i4wa_ b.36.1.1 97 see topology u'Disks large homolog 4' Homo sapiens
ASTRAL-1.75B d3i5ra_ b.34.2.1 81 see topology u'Phosphatidylinositol 3-kinase regulatory subunit alpha' Homo sapiens
ASTRAL-1.75B d3i6va_ c.94.1.0 218 see topology u'His/Glu/Gln/Arg/opine family ABC transporter, periplasmic His/Glu/Gln/Arg/opine family-binding protein' Ruegeria pomeroyi
ASTRAL-1.75B d3i76a_ c.108.1.0 223 see topology u'Putative HAD-hydrolase YfnB' Bacillus subtilis
ASTRAL-1.75B d3i9la_ c.23.14.3 251 see topology u'ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase' Aplysia californica
ASTRAL-1.75B d3ia8a_ b.60.1.0 156 see topology u'THAP domain-containing protein 4' Homo sapiens
ASTRAL-1.75B d3iaca_ c.1.9.0 454 see topology u'Uronate isomerase' Salmonella enterica
ASTRAL-1.75B d3iaia_ b.74.1.0 249 see topology u'Carbonic anhydrase 9' Homo sapiens
ASTRAL-1.75B d3iara_ c.1.9.1 360 see topology u'Adenosine deaminase' Homo sapiens
ASTRAL-1.75B d3ibxd_ a.132.1.0 216 see topology u'Aminopyrimidine aminohydrolase' Helicobacter pylori
ASTRAL-1.75B d3ie5b_ d.129.3.0 164 see topology u'Phenolic oxidative coupling protein Hyp-1' Hypericum perforatum
ASTRAL-1.75B d3ieka_ d.157.1.10 431 see topology u'Ribonuclease TTHA0252' Thermus thermophilus
ASTRAL-1.75B d3ifta_ b.84.1.0 136 see topology u'Glycine cleavage system H protein' Mycobacterium tuberculosis
ASTRAL-1.75B d3igra_ d.108.1.0 179 see topology u'Ribosomal-protein-S5-alanine N-acetyltransferase' Aliivibrio fischeri
ASTRAL-1.75B d3igsa_ c.1.2.0 225 see topology u'Putative N-acetylmannosamine-6-phosphate 2-epimerase 2' Salmonella enterica
ASTRAL-1.75B d3igxa_ c.1.10.0 316 see topology u'Transaldolase' Francisella tularensis
ASTRAL-1.75B d3iija_ c.37.1.1 175 see topology u'Adenylate kinase isoenzyme 6' Homo sapiens
ASTRAL-1.75B d3iira_ b.42.4.0 190 see topology u'Trypsin inhibitor' Murraya koenigii
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins