ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
Advance Search
Residue >=
Residue <=
Molecule: [Protein molecule containing the word as query]
Source: [Source organism of protein ]
 
 help

Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3hpea_ b.61.6.0 164 see topology u'Conserved hypothetical secreted protein' Helicobacter pylori
ASTRAL-1.75B d3hpwa_ b.34.6.1 101 see topology u'Toxin CcdB' Escherichia coli
ASTRAL-1.75B d3hqaa_ a.50.1.1 66 see topology u'Complement C5' Homo sapiens
ASTRAL-1.75B d3hqxa_ b.82.1.0 104 see topology u'UPF0345 protein ACIAD0356' Acinetobacter sp. ADP1
ASTRAL-1.75B d3htna_ d.290.1.0 140 see topology u'Uncharacterized protein' Bacteroides thetaiotaomicron
ASTRAL-1.75B d3hupa_ d.169.1.1 121 see topology u'Early activation antigen CD69' Homo sapiens
ASTRAL-1.75B d3hvma_ d.126.1.6 330 see topology u'Putative' Helicobacter pylori
ASTRAL-1.75B d3hvva_ c.47.1.10 167 see topology u'Thiol peroxidase' Escherichia coli
ASTRAL-1.75B d3hxia_ d.86.1.0 182 see topology — —
ASTRAL-1.75B d3hyfa_ c.55.3.1 143 see topology u'Reverse transcriptase/RNaseH' Human immunodeficiency virus 1
ASTRAL-1.75B d3hyga_ d.92.1.0 217 see topology u'A disintegrin and metalloproteinase with thrombospondin motifs 5' Homo sapiens
ASTRAL-1.75B d3hzaa_ b.85.4.1 162 see topology u"Deoxyuridine 5'-triphosphate nucleotidohydrolase" Mycobacterium tuberculosis
ASTRAL-1.75B d3hzba_ b.11.1.0 86 see topology u'Predicted carbohydrate binding protein' Flavobacterium johnsoniae
ASTRAL-1.75B d3hzsa_ d.2.1.0 209 see topology u'Monofunctional glycosyltransferase' Staphylococcus aureus
ASTRAL-1.75B d3i06a_ d.3.1.1 215 see topology u'Cruzipain' Trypanosoma cruzi
ASTRAL-1.75B d3i11a_ d.157.1.1 215 see topology u'Beta-lactamase 2' Bacillus cereus
ASTRAL-1.75B d3i35a_ b.34.2.1 57 see topology u'LIM and SH3 domain protein 1' Homo sapiens
ASTRAL-1.75B d3i3qa_ b.82.2.10 203 see topology u'Alpha-ketoglutarate-dependent dioxygenase AlkB' Escherichia coli
ASTRAL-1.75B d3i42a_ c.23.1.0 118 see topology u'Response regulator receiver domain protein (CheY-like)' Methylobacillus flagellatus
ASTRAL-1.75B d3i47a_ c.14.1.0 259 see topology u'Enoyl CoA hydratase/isomerase (Crotonase)' Legionella pneumophila
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins