ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3hdga_ c.23.1.0 120 see topology u'Uncharacterized protein' Wolinella succinogenes
ASTRAL-1.75B d3hdva_ c.23.1.0 117 see topology u'Response regulator' Pseudomonas putida
ASTRAL-1.75B d3heba_ c.23.1.0 139 see topology u'Response regulator receiver domain protein (CheY)' Rhodospirillum rubrum
ASTRAL-1.75B d3heia_ b.18.1.0 174 see topology u'Ephrin type-A receptor 2' Homo sapiens
ASTRAL-1.75B d3heib_ b.6.1.0 132 see topology u'Ephrin-A1' Homo sapiens
ASTRAL-1.75B d3hf5a_ d.58.4.19 115 see topology u'4-methylmuconolactone methylisomerase' Pseudomonas reinekei
ASTRAL-1.75B d3hgma_ c.26.2.0 147 see topology u'TRAP-T-associated universal stress protein TeaD' Halomonas elongata
ASTRAL-1.75B d3hgpa_ b.47.1.2 229 see topology u'Chymotrypsin-like elastase family member 1' Sus scrofa
ASTRAL-1.75B d3hh8a_ c.92.2.2 280 see topology u'Metal ABC transporter substrate-binding lipoprotein' Streptococcus pyogenes
ASTRAL-1.75B d3hhha_ a.4.5.0 100 see topology u'Transcriptional regulator, PadR family' Enterococcus faecalis
ASTRAL-1.75B d3hhtb_ b.34.4.4 227 see topology u'Nitrile hydratase beta subunit' Aeribacillus pallidus
ASTRAL-1.75B d3hida_ c.37.1.10 424 see topology u'Adenylosuccinate synthetase' Yersinia pestis
ASTRAL-1.75B d3hkwa_ e.8.1.4 561 see topology u'Genome polyprotein' Hepatitis C virus
ASTRAL-1.75B d3hl8a_ c.55.3.5 456 see topology u'Exodeoxyribonuclease I' Escherichia coli
ASTRAL-1.75B d3hlxa_ a.132.1.4 254 see topology u'Pyrroloquinoline-quinone synthase' Klebsiella pneumoniae
ASTRAL-1.75B d3hmca_ c.1.8.0 189 see topology u'Putative prophage LambdaBa04, glycosyl hydrolase, family 25' Bacillus anthracis
ASTRAL-1.75B d3hmsa_ g.10.1.1 91 see topology u'Hepatocyte growth factor' Homo sapiens
ASTRAL-1.75B d3hnym_ b.18.1.2 156 see topology u'Coagulation factor VIII' Homo sapiens
ASTRAL-1.75B d3hoaa_ d.92.1.0 509 see topology u'Thermostable carboxypeptidase 1' Thermus thermophilus
ASTRAL-1.75B d3hp4a_ c.23.10.0 182 see topology u'GDSL-esterase' Pseudoalteromonas sp. 643A
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins