ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3ge3e_ d.137.1.1 102 see topology u'Toluene-4-monooxygenase system protein D' Pseudomonas mendocina
ASTRAL-1.75B d3ge6a_ d.90.1.0 200 see topology u'Nitroreductase' Exiguobacterium sibiricum
ASTRAL-1.75B d3gfsa_ c.23.5.4 167 see topology u'FMN-dependent NADPH-azoreductase' Bacillus subtilis
ASTRAL-1.75B d3gg7a_ c.1.9.0 243 see topology u'Uncharacterized protein' Deinococcus radiodurans
ASTRAL-1.75B d3giua_ c.56.4.0 209 see topology u'Pyrrolidone-carboxylate peptidase' Staphylococcus aureus
ASTRAL-1.75B d3gixa_ c.47.1.0 141 see topology u'Thioredoxin-like protein 4B' Homo sapiens
ASTRAL-1.75B d3gj0a_ c.37.1.8 207 see topology u'GTP-binding nuclear protein Ran' Homo sapiens
ASTRAL-1.75B d3gkxa_ c.47.1.0 115 see topology u'Putative ArsC family related protein' Bacteroides fragilis
ASTRAL-1.75B d3gl9a_ c.23.1.0 119 see topology u'Response regulator' Thermotoga maritima
ASTRAL-1.75B d3gmxa_ d.98.1.0 154 see topology u'BLP' Streptomyces clavuligerus
ASTRAL-1.75B d3gnja_ c.47.1.0 107 see topology u'Thioredoxin domain protein' Desulfitobacterium hafniense
ASTRAL-1.75B d3govb_ b.47.1.0 251 see topology u'Mannan-binding lectin serine protease 1' Homo sapiens
ASTRAL-1.75B d3gp6a_ f.4.1.2 155 see topology u'Lipid A palmitoyltransferase PagP' Escherichia coli
ASTRAL-1.75B d3gp9a_ d.58.6.1 133 see topology u'Nucleoside diphosphate kinase' Acanthamoeba polyphaga mimivirus
ASTRAL-1.75B d3grda_ d.17.4.0 128 see topology u'Uncharacterized protein' Bacillus cereus
ASTRAL-1.75B d3grsa1 c.3.1.5 221 see topology u'Glutathione reductase, mitochondrial' Homo sapiens
ASTRAL-1.75B d3grsa2 c.3.1.5 125 see topology u'Glutathione reductase, mitochondrial' Homo sapiens
ASTRAL-1.75B d3grsa3 d.87.1.1 115 see topology u'Glutathione reductase, mitochondrial' Homo sapiens
ASTRAL-1.75B d3gu3a_ c.66.1.49 268 see topology u'Methyltransferase' Bacillus cereus
ASTRAL-1.75B d3gu4a_ d.144.1.7 280 see topology u'Death-associated protein kinase 1' Homo sapiens
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins