ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3fuca_ c.56.2.1 274 see topology u'Purine nucleoside phosphorylase' Bos taurus
ASTRAL-1.75B d3fvsa_ c.67.1.1 418 see topology u'Kynurenine--oxoglutarate transaminase 1' Homo sapiens
ASTRAL-1.75B d3fw3a_ b.74.1.1 237 see topology u'Carbonic anhydrase 4' Homo sapiens
ASTRAL-1.75B d3fwba_ a.39.1.5 153 see topology u'Cell division control protein 31' Saccharomyces cerevisiae
ASTRAL-1.75B d3fz2a_ d.323.1.1 124 see topology u'Tail tube terminator protein' Escherichia virus Lambda
ASTRAL-1.75B d3fz4a_ c.47.1.0 117 see topology u'Putative arsenate reductase' Streptococcus mutans
ASTRAL-1.75B d3fz9a_ c.47.1.0 106 see topology — —
ASTRAL-1.75B d3fzqa_ c.108.1.0 265 see topology u'Putative hydrolase, HAD superfamily, subfamily IIB' Clostridioides difficile
ASTRAL-1.75B d3g02a_ c.69.1.11 387 see topology u'Epoxide hydrolase' Aspergillus niger
ASTRAL-1.75B d3g0ma_ d.224.1.1 138 see topology u'Cysteine desulfuration protein SufE' Salmonella enterica
ASTRAL-1.75B d3g2sa_ a.118.9.2 146 see topology u'ADP-ribosylation factor-binding protein GGA1' Homo sapiens
ASTRAL-1.75B d3g46a_ a.1.1.2 146 see topology u'Globin-1' Scapharca inaequivalvis
ASTRAL-1.75B d3g9ma_ g.39.1.2 78 see topology u'Glucocorticoid receptor' Rattus norvegicus
ASTRAL-1.75B d3gada_ d.80.1.3 115 see topology u'Macrophage migration inhibitory factor-like protein' Plasmodium yoelii
ASTRAL-1.75B d3gaga_ d.90.1.0 198 see topology u'Putative NADH dehydrogenase NAD(P)H nitroreductase' Streptococcus mutans
ASTRAL-1.75B d3gaxa_ d.17.1.2 107 see topology u'Cystatin-C' Homo sapiens
ASTRAL-1.75B d3gdfa_ c.2.1.0 267 see topology u'Probable NADP-dependent mannitol dehydrogenase' Cladosporium herbarum
ASTRAL-1.75B d3gdla_ c.1.2.3 257 see topology u"Orotidine 5'-phosphate decarboxylase" Saccharomyces cerevisiae
ASTRAL-1.75B d3ge3a_ a.25.1.2 491 see topology u'Toluene-4-monooxygenase system protein A' Pseudomonas mendocina
ASTRAL-1.75B d3ge3c_ d.15.12.0 83 see topology u'Toluene-4-monooxygenase system protein B' Pseudomonas mendocina
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins