ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3feaa_ a.42.1.0 83 see topology u'Protein Mdm4' Homo sapiens
ASTRAL-1.75B d3feua_ c.47.1.0 175 see topology u'Lipoprotein, putative' Aliivibrio fischeri
ASTRAL-1.75B d3ff1a_ c.80.1.2 435 see topology u'Glucose-6-phosphate isomerase' Staphylococcus aureus
ASTRAL-1.75B d3ff7c_ d.169.1.0 112 see topology u'Killer cell lectin-like receptor subfamily G member 1' Homo sapiens
ASTRAL-1.75B d3ffha_ c.67.1.0 350 see topology u'Histidinol-phosphate aminotransferase' Listeria innocua
ASTRAL-1.75B d3fgya_ d.17.4.0 132 see topology u'Uncharacterized protein' Paraburkholderia xenovorans
ASTRAL-1.75B d3fhva_ d.24.1.1 150 see topology u'Prepilin' Salmonella enterica
ASTRAL-1.75B d3fila_ d.15.7.1 55 see topology u'Immunoglobulin G-binding protein G' Streptococcus sp. 'group G'
ASTRAL-1.75B d3fiqa_ b.60.1.0 154 see topology u'Odorant-binding protein' Rattus norvegicus
ASTRAL-1.75B d3flga_ b.34.9.2 135 see topology u'DNA (cytosine-5)-methyltransferase 3B' Homo sapiens
ASTRAL-1.75B d3fnca_ d.108.1.0 157 see topology u'Lin0611 protein' Listeria innocua
ASTRAL-1.75B d3fpqa_ d.144.1.7 262 see topology u'Serine/threonine-protein kinase WNK1' Rattus norvegicus
ASTRAL-1.75B d3frua1 b.1.1.2 91 see topology u'IgG receptor FcRn large subunit p51' Rattus norvegicus
ASTRAL-1.75B d3frua2 d.19.1.1 178 see topology u'IgG receptor FcRn large subunit p51' Rattus norvegicus
ASTRAL-1.75B d3fsaa_ b.6.1.1 122 see topology u'Azurin' Pseudomonas aeruginosa
ASTRAL-1.75B d3fsda_ d.17.4.0 120 see topology u'Uncharacterized protein' Rhodospirillum rubrum
ASTRAL-1.75B d3fsia_ e.8.1.2 248 see topology u'Gag-Pol polyprotein' Murine leukemia virus
ASTRAL-1.75B d3fsoa_ b.1.27.0 109 see topology u'Integrin beta-4' Homo sapiens
ASTRAL-1.75B d3ft1a_ b.7.3.0 100 see topology u'Phl p 3 allergen' Phleum pratense
ASTRAL-1.75B d3ftba_ c.67.1.0 334 see topology u'Histidinol-phosphate aminotransferase' Clostridium acetobutylicum
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins