ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3efza1 a.118.7.1 215 see topology u'14-3-3 protein' Cryptosporidium parvum
ASTRAL-1.75B d3eg7a_ d.108.1.0 169 see topology — —
ASTRAL-1.75B d3eipa_ d.26.2.1 84 see topology u'Colicin-E3 immunity protein' Escherichia coli
ASTRAL-1.75B d3ej9a_ d.80.1.1 62 see topology u'Alpha-subunit of trans-3-chloroacrylic acid dehalogenase' Pseudomonas pavonaceae
ASTRAL-1.75B d3ej9b_ d.80.1.1 59 see topology u'Beta-subunit of trans-3-chloroacrylic acid dehalogenase' Pseudomonas pavonaceae
ASTRAL-1.75B d3ejbb_ a.104.1.0 380 see topology u'Biotin biosynthesis cytochrome P450' Bacillus subtilis
ASTRAL-1.75B d3ejja_ a.26.1.2 148 see topology u'Macrophage colony-stimulating factor 1' Mus musculus
ASTRAL-1.75B d3ejna1 a.118.8.6 439 see topology u'Putative exported protein' Bacteroides fragilis
ASTRAL-1.75B d3ejva1 d.17.4.28 152 see topology u'Uncharacterized protein' Novosphingobium aromaticivorans
ASTRAL-1.75B d3elia1 d.129.3.5 138 see topology u'Aha1 domain protein' Ruegeria pomeroyi
ASTRAL-1.75B d3elna_ b.82.1.19 187 see topology u'Cysteine dioxygenase type 1' Rattus norvegicus
ASTRAL-1.75B d3emca_ c.1.8.3 331 see topology u'Endo-1,4-beta-xylanase B' Paenibacillus barcinonensis
ASTRAL-1.75B d3emva_ c.56.2.1 246 see topology u'Uridine phosphorylase, putative' Plasmodium vivax
ASTRAL-1.75B d3en8a1 d.17.4.20 124 see topology u'Uncharacterized protein' Paraburkholderia xenovorans
ASTRAL-1.75B d3eofa_ d.90.1.0 238 see topology u'Putative oxidase' Bacteroides fragilis
ASTRAL-1.75B d3eoja_ b.75.1.1 359 see topology u'Bacteriochlorophyll a protein' Prosthecochloris aestuarii
ASTRAL-1.75B d3epra_ c.108.1.14 260 see topology u'Hydrolase, haloacid dehalogenase-like family' Streptococcus agalactiae
ASTRAL-1.75B d3epua_ d.198.1.0 134 see topology u'Putative cytoplasmic protein' Salmonella enterica
ASTRAL-1.75B d3epwa_ c.70.1.1 326 see topology u'IAG-nucleoside hydrolase' Trypanosoma vivax
ASTRAL-1.75B d3eqza_ c.23.1.0 124 see topology u'Response regulator' Colwellia psychrerythraea
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins