ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
Advance Search
Residue >=
Residue <=
Molecule: [Protein molecule containing the word as query]
Source: [Source organism of protein ]
 
 help

Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3er7a1 d.17.4.24 115 see topology u'Uncharacterized protein' Exiguobacterium sibiricum
ASTRAL-1.75B d3er9b_ e.69.1.1 445 see topology u'Poly(A) polymerase catalytic subunit' Vaccinia virus
ASTRAL-1.75B d3ersx_ b.40.4.4 112 see topology u'tRNA-binding protein YgjH' Escherichia coli
ASTRAL-1.75B d3erwa_ c.47.1.0 131 see topology u'Sporulation thiol-disulfide oxidoreductase A' Bacillus subtilis
ASTRAL-1.75B d3es6b1 b.1.18.23 118 see topology u'Prolactin-inducible protein' Homo sapiens
ASTRAL-1.75B d3etja1 b.84.2.1 79 see topology u'N5-carboxyaminoimidazole ribonucleotide synthase' Escherichia coli
ASTRAL-1.75B d3etja2 c.30.1.1 78 see topology u'N5-carboxyaminoimidazole ribonucleotide synthase' Escherichia coli
ASTRAL-1.75B d3etja3 d.142.1.2 198 see topology u'N5-carboxyaminoimidazole ribonucleotide synthase' Escherichia coli
ASTRAL-1.75B d3euca_ c.67.1.0 350 see topology u'Histidinol-phosphate aminotransferase 2' Cupriavidus pinatubonensis
ASTRAL-1.75B d3evfa_ c.66.1.0 261 see topology u'Genome polyprotein' Yellow fever virus
ASTRAL-1.75B d3ew8a_ c.42.1.2 357 see topology u'Histone deacetylase 8' Homo sapiens
ASTRAL-1.75B d3eyea_ c.38.1.0 153 see topology u'PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 1 (EIIB-AGA)' Escherichia coli
ASTRAL-1.75B d3eyka_ b.19.1.2 319 see topology u'Hemagglutinin' Influenza A virus
ASTRAL-1.75B d3ezla_ c.2.1.0 243 see topology u'Acetoacetyl-CoA reductase' Burkholderia pseudomallei
ASTRAL-1.75B d3ezqa_ a.77.1.2 115 see topology u'Tumor necrosis factor receptor superfamily member 6' Homo sapiens
ASTRAL-1.75B d3ezsa_ c.67.1.0 371 see topology u'Solute-binding signature and mitochondrial signature protein (AspB)' Helicobacter pylori
ASTRAL-1.75B d3ezwa1 c.55.1.4 251 see topology u'Glycerol kinase' Escherichia coli
ASTRAL-1.75B d3ezwa2 c.55.1.4 247 see topology u'Glycerol kinase' Escherichia coli
ASTRAL-1.75B d3f04a_ b.7.1.2 136 see topology u'Synaptotagmin-1' Homo sapiens
ASTRAL-1.75B d3f08a_ d.129.3.8 135 see topology u'Uncharacterized protein' Bacillus thuringiensis
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins