ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3ea1a_ c.1.18.2 296 see topology u'1-phosphatidylinositol phosphodiesterase' Bacillus thuringiensis
ASTRAL-1.75B d3eaaa_ b.157.1.0 158 see topology u'EvpC' Edwardsiella tarda
ASTRAL-1.75B d3eaua_ c.1.7.1 327 see topology u'Voltage-gated potassium channel subunit beta-2' Rattus norvegicus
ASTRAL-1.75B d3eb2a_ c.1.10.0 288 see topology u'Putative dihydrodipicolinate synthetase' Rhodopseudomonas palustris
ASTRAL-1.75B d3ebta1 d.17.4.9 126 see topology u'Uncharacterized protein' Burkholderia pseudomallei
ASTRAL-1.75B d3ebya1 d.17.4.4 151 see topology u'Aromatic-ring-hydroxylating dioxygenase, beta subunit' Novosphingobium aromaticivorans
ASTRAL-1.75B d3ec6a_ b.45.1.0 126 see topology u"Pyridoxamine 5'-phosphate oxidase family protein" Bacillus anthracis
ASTRAL-1.75B d3ec9a1 d.17.4.10 125 see topology u'Uncharacterized protein' Burkholderia thailandensis
ASTRAL-1.75B d3ecfa1 d.17.4.21 124 see topology u'Uncharacterized protein' Anabaena variabilis
ASTRAL-1.75B d3echa_ a.4.5.28 129 see topology u'Multidrug resistance operon repressor' Pseudomonas aeruginosa
ASTRAL-1.75B d3ecma_ a.211.1.0 338 see topology u"High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A" Homo sapiens
ASTRAL-1.75B d3ecoa_ a.4.5.0 135 see topology u'Uncharacterized protein' Staphylococcus aureus
ASTRAL-1.75B d3edha_ d.92.1.0 193 see topology u'Bone morphogenetic protein 1' Homo sapiens
ASTRAL-1.75B d3eeqa1 c.151.1.1 115 see topology u'Cobalamin biosynthesis protein G homolog, putative (CbiG-like)' Sulfolobus solfataricus
ASTRAL-1.75B d3eeqa2 c.152.1.1 196 see topology u'Cobalamin biosynthesis protein G homolog, putative (CbiG-like)' Sulfolobus solfataricus
ASTRAL-1.75B d3eera_ d.227.1.0 138 see topology u'Organic hydroperoxide resistance protein, putative' Vibrio cholerae
ASTRAL-1.75B d3eevc_ b.81.1.3 208 see topology u'Chloramphenicol acetyltransferase' Vibrio cholerae
ASTRAL-1.75B d3ef4a_ b.6.1.0 124 see topology u'Blue copper protein' Hyphomicrobium denitrificans
ASTRAL-1.75B d3ef8a1 d.17.4.28 143 see topology u'Uncharacterized protein' Novosphingobium aromaticivorans
ASTRAL-1.75B d3efba1 c.124.1.8 239 see topology u'Uncharacterized protein' Shigella flexneri
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins