ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d1a8ya3 c.47.1.3 112 see topology u'Calsequestrin-1' Oryctolagus cuniculus
ASTRAL-1.75B d1a99a_ c.94.1.1 341 see topology u'Putrescine-binding periplasmic protein' Escherichia coli
ASTRAL-1.75B d1a9na_ c.10.2.4 162 see topology u"U2 small nuclear ribonucleoprotein A'" Homo sapiens
ASTRAL-1.75B d1a9xa1 a.92.1.1 153 see topology u'Carbamoyl-phosphate synthase large chain' Escherichia coli
ASTRAL-1.75B d1a9xa2 c.24.1.1 138 see topology u'Carbamoyl-phosphate synthase large chain' Escherichia coli
ASTRAL-1.75B d1a9xa3 c.30.1.1 127 see topology u'Carbamoyl-phosphate synthase large chain' Escherichia coli
ASTRAL-1.75B d1a9xa5 d.142.1.2 275 see topology u'Carbamoyl-phosphate synthase large chain' Escherichia coli
ASTRAL-1.75B d1a9xa6 d.142.1.2 244 see topology u'Carbamoyl-phosphate synthase large chain' Escherichia coli
ASTRAL-1.75B d1a9xb1 c.8.3.1 151 see topology u'Carbamoyl-phosphate synthase small chain' Escherichia coli
ASTRAL-1.75B d1a9xb2 c.23.16.1 227 see topology u'Carbamoyl-phosphate synthase small chain' Escherichia coli
ASTRAL-1.75B d1ab8a_ d.58.29.1 177 see topology u'Adenylate cyclase type 2' Rattus norvegicus
ASTRAL-1.75B d1abaa_ c.47.1.1 87 see topology u'Glutaredoxin' Enterobacteria phage T4 sensu lato
ASTRAL-1.75B d1abva_ a.70.1.1 105 see topology u'ATP synthase subunit delta' Escherichia coli
ASTRAL-1.75B d1ac0a_ b.3.1.1 108 see topology u'Glucoamylase' Aspergillus niger
ASTRAL-1.75B d1ac5a_ c.69.1.5 483 see topology u'Pheromone-processing carboxypeptidase KEX1' Saccharomyces cerevisiae
ASTRAL-1.75B d1acoa1 c.8.2.1 226 see topology u'Aconitate hydratase, mitochondrial' Bos taurus
ASTRAL-1.75B d1acoa2 c.83.1.1 527 see topology u'Aconitate hydratase, mitochondrial' Bos taurus
ASTRAL-1.75B d1ad2a_ e.24.1.1 224 see topology u'50S ribosomal protein L1' Thermus thermophilus
ASTRAL-1.75B d1adua1 a.54.1.1 86 see topology u'DNA-binding protein' Human mastadenovirus C
ASTRAL-1.75B d1adua2 g.51.1.1 79 see topology u'DNA-binding protein' Human mastadenovirus C
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins