ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d1a6qa1 a.159.1.1 68 see topology u'Protein phosphatase 1A' Homo sapiens
ASTRAL-1.75B d1a6qa2 d.219.1.1 295 see topology u'Protein phosphatase 1A' Homo sapiens
ASTRAL-1.75B d1a6sa_ a.61.1.4 87 see topology u'Gag-Pro polyprotein' Rous sarcoma virus
ASTRAL-1.75B d1a73a_ d.4.1.3 162 see topology u'Intron-encoded endonuclease I-PpoI' Physarum polycephalum
ASTRAL-1.75B d1a79a1 c.52.2.1 97 see topology u'tRNA-splicing endonuclease' Methanocaldococcus jannaschii
ASTRAL-1.75B d1a79a2 d.75.1.1 74 see topology u'tRNA-splicing endonuclease' Methanocaldococcus jannaschii
ASTRAL-1.75B d1a7ja_ c.37.1.6 279 see topology u'Phosphoribulokinase 1' Rhodobacter sphaeroides
ASTRAL-1.75B d1a7sa_ b.47.1.2 221 see topology u'Azurocidin' Homo sapiens
ASTRAL-1.75B d1a7ta_ d.157.1.1 227 see topology u'Beta-lactamase type II' Bacteroides fragilis
ASTRAL-1.75B d1a8da1 b.29.1.6 247 see topology u'Tetanus toxin' Clostridium tetani
ASTRAL-1.75B d1a8da2 b.42.4.2 205 see topology u'Tetanus toxin' Clostridium tetani
ASTRAL-1.75B d1a8la1 c.47.1.2 119 see topology u'Glutaredoxin-like protein' Pyrococcus furiosus
ASTRAL-1.75B d1a8la2 c.47.1.2 107 see topology u'Glutaredoxin-like protein' Pyrococcus furiosus
ASTRAL-1.75B d1a8oa_ a.28.3.1 66 see topology u'Gag-Pol polyprotein' Human immunodeficiency virus 1
ASTRAL-1.75B d1a8pa1 b.43.4.2 99 see topology u'Ferredoxin--NADP reductase' Azotobacter vinelandii
ASTRAL-1.75B d1a8pa2 c.25.1.1 158 see topology u'Ferredoxin--NADP reductase' Azotobacter vinelandii
ASTRAL-1.75B d1a8qa_ c.69.1.12 274 see topology u'Non-heme chloroperoxidase CPO-A1' Streptomyces aureofaciens
ASTRAL-1.75B d1a8ra_ d.96.1.1 221 see topology u'GTP cyclohydrolase 1' Escherichia coli
ASTRAL-1.75B d1a8ya1 c.47.1.3 124 see topology u'Calsequestrin-1' Oryctolagus cuniculus
ASTRAL-1.75B d1a8ya2 c.47.1.3 102 see topology u'Calsequestrin-1' Oryctolagus cuniculus
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins