ProLego Protein as lego blocks ...
 

Topology view of query protein [ProLego results]

Protein Information
Domain Id 1ct9A01
DB_Source-ClassCATH 3.5, 3.60.20.10
MoleculeAsparagine synthetase B [glutamine-hydrolyzing]
Residues192
Sequence
SSE Sequence*(15) EHEEEEHHEEEEEEE
* Secondary structure Elements (SSE) from N to C terminal of the PDB chain. [SSE: H ("Alpha Helix"); E ("Strands")]
Protein Topology 

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand]
Ca.Ca.Ea.0.Ea.Ca.Hp.Cp.Ea.0.Ea.0.0.Ea-0.Cp.Ep.Ep.0.Ca.0.Ca.0.Ep.Ea.0.0-Ea.0.0.0.Cp.Ea.0.0.0.0.0.0-0.0.0.0.0.0.0.0.0.Ea.0-Ea.0.0.Ea.0.0.0.0.0.0-0.0.0.0.0.0.0.0.0-0.0.0.0.0.0.0.0-Ep.0.0.0.0.0.0-Ea.0.0.0.0.0-0.Cp.0.0.0-Ea.0.0.0-0.0.0-0.0-0

Prefence of topology : False

[ Hover over the plot rectangles to know more about SSE-contact ]

Linear Topology Graph : 1ct9A01
shapeImage
Protein Id: 1ct9A01

Figure Detail - Blocks: Helix (rectangles), Strands (triangles); Colormap: Red (N-terminal),--(Green)-- Blue (C-Terminal). Spatial Connectivity by arc Lines [Hover over the image to know the SSE detail]

Topology Graph : 1ct9A01
shapeImage
Protein Id: 1ct9A01

Figure Detail - Blocks: Helix (circle), Strands (arrow); Colormap: Red (N-terminal), Blue (C-Terminal). Spatial Connectivity by dotted Lines [Hover over the image to know the SSE detail]

Modules in queried Topology
#SSE SSE string Contact String Preferrence  ProteinDB  DomainsDB
3 HEE Ca.Ea-Cp True 3E7R:L, 4GV5:A, 4GV5:B, 4GV5:C, 4OWT:C, 4X8W:G, 5TVO:B, 1MHM:B, 2I61:A, d1ev0a_, d1fjna_, d1icaa_, d1jxca_, d1lira_, d1mm0a_, d1n8ma_, d1olza3, d1pnha_, d1shyb2, d2i61a_, d2pspa2, 1ev0A00, 1jxcA00, 1shyB02, 1wmtA00,
3 EEE Ea.0-Ep False d2jdih2,
3 EEH Ea.Ca-0 True 3OW2:T, 1VQO:U, 2PUY:A, d1vq8u1, d1we9a_, d1wjva1, d2puya_, 1vq8U00,
3 EEE Ea.0-0 True 2YFV:C, 2ZJR:U, 3B08:B, 3B08:E, 3B08:H, 3B08:K, 3D2Q:D, 3EGG:D, 3GL6:A, 3HVQ:D, 3KXY:Y, 3MMY:B, 3MMY:D, 3MMY:F, 3MMY:H, 3O7A:A, 3TND:D, 3TND:F, 3ZG9:A, 4EAZ:C, 4EAZ:D, 4LM6:A, 4LM6:C, 4LMS:A, 4LMX:A, 4LMX:C, 4LMX:E, 4LMX:G, 4LMX:I, 4LMX:K, 4MMS:A, 4MMS:C, 4MMS:E, 4Q4W:4, 4QF2:A, 4QF2:B, 4QF2:C, 4QF2:D, 4QF3:A, 4QF3:B, 4WJW:A, 5E4X:A, 5IYZ:E, 5KX5:E, 1D4M:4, 1G3J:B, 1HXS:4, 1J8E:A, 1JY2:O, 1VPZ:A, 1XG0:A, 1XG0:B, 1XU1:R, 2BTI:A, d1cxxa2, d1k0ra4, d1lv3a_, d1wvka_, d1xg0a_, d1xpaa2, d1xu1r_, d1xu2r_, d2btia_, d2bv3a4, d2glia4, d2gtlm2, d2zjru1, d3ryce_, 1e0aB00, 1g3jD00, 1jy2O00, 1lv3A00, 1wvkA00, 1xg0B00, 2fyuI00, 2gliA04,
3 EEE Ea.0-Ea False 4C2M:1, 4C2M:L, 4KSN:A, 4SGB:I, 6RXN:A, 2DSX:A, 2RDV:A, 2V3B:B, d1lkoa2, d1pfva3, d1yuza2, d1zina2, d2cona1, d4sgbi_, 2dsxA00, 4sgbI00,
3 EEE 0.Ea-0 True 2Y8T:B, 2Y8T:E, 2ZJR:Z, 3H31:A, 3O27:B, 3SF4:D, 3SF4:E, 3SF4:F, 4I6M:D, 4XO1:A, 4YIZ:B, 4YIZ:D, 4YIZ:F, 5DM6:Z, 5ITM:A, 5ITM:B, 5ITM:C, 5ITM:D, 5ITM:E, 5ITM:F, 1AVY:A, 1HLQ:A, 1ICF:I, 1ISU:A, 1PML:A, 2ATC:B, 2DLB:A, 2GGV:A, d1hlqa_, d1icfi_, d1isua_, d1ppji_, d1rwsa_, d1skza1, d1tdha3, d1yfba1, d2dlba1, d2i9aa2, d2qam01, d2zdra1, d3h31a_, 1avyA00, 1avyB00, 1avyA00, 1avyB00, 1hlqA00, 1icfI00, 1ppjI00, 1rwsA00, 2fd6A02,
4 EHEE Ca.Ca.Ea-0.Cp-Ea True 3KU7:A, 3KU7:B, 3ODV:B, 3ONR:A, 3ONR:B, 3ONR:C, 3ONR:D, 3ONR:E, 3ONR:F, 3ONR:G, 3ONR:H, 3ONR:I, 3ONR:J, 3ONR:K, 3ONR:L, d1j5ja_, d1ozza_, d1pvza_, d1scoa_, d1sisa_, d1xrsb2, 1i2uA00, 1xrsB01,
4 EEEE Ea.0.Ea-Ep.Ep-0 False d1deca_,
4 EEEE Ea.0.Ea-0.Ep-0 False d1rutx3, d1uzka1,
4 EEEE Ea.0.0-Ea.0-0 False 3U28:B, 2AUS:B, d3u28b_,
4 EEEE 0.0.Ea-0.0-0 True 3ZIA:I, 3ZIA:S, 5LSL:E, 5LSL:G, 5LSL:H, 2DSR:G, d2dsrg1,
Protein In ProLegoDB with identical/similar Topology