ProLego Protein as lego blocks ...
 

Topology view of query protein [ProLego results]

Protein Information
PDBId & Chain4M7G : A
MoleculeTrypsin
Residues223
Sequence
SSE Sequence*(17) EEEEHEEEEEEHEEEEH
* Secondary structure Elements (SSE) from N to C terminal of the PDB chain. [SSE: H ("Alpha Helix"); E ("Strands")]
Protein Topology 

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand]
0.Ea.Ea.Ca.0.Ea.Ea.0.0.Ea.0.Cp.Ep.Ea.Ea.0-0.Ep.Ca.0.Ca.Ep.0.0.0.0.0.0.Ea.Ep.Ca-0.Cp.Ep.0.Cp.0.0.0.0.0.0.0.Ea.0-0.Ea.0.Ea.0.0.0.0.0.Ea.0.Ca.0-0.0.0.0.0.0.0.0.0.Ep.0.0-0.Ep.Ea.0.0.0.0.0.Ep.0.0-0.0.0.0.0.0.0.0.0.0-0.Ep.0.0.0.0.0.0.Ca-0.0.0.0.0.0.0.Cp-Ea.0.0.0.Cp.0.Ca-0.0.Ep.Ep.0.0-0.Ea.Ea.0.0-0.0.0.Ca-0.0.Ca-0.0-0

Prefence of topology : False

[ Hover over the plot rectangles to know more about SSE-contact ]

Linear Topology Graph : 4M7G_A
shapeImage
Protein Id: 4M7G_A

Figure Detail - Blocks: Helix (rectangles), Strands (triangles); Colormap: Red (N-terminal),--(Green)-- Blue (C-Terminal). Spatial Connectivity by arc Lines [Hover over the image to know the SSE detail]

Topology Graph : 4M7G_A
shapeImage
Protein Id: 4M7G_A

Figure Detail - Blocks: Helix (circle), Strands (arrow); Colormap: Red (N-terminal), Blue (C-Terminal). Spatial Connectivity by dotted Lines [Hover over the image to know the SSE detail]

Modules in queried Topology
#SSE SSE string Contact String Preferrence  ProteinDB  DomainsDB
3 EEE 0.Ea-0 True 2Y8T:B, 2Y8T:E, 2ZJR:Z, 3H31:A, 3O27:B, 3SF4:D, 3SF4:E, 3SF4:F, 4I6M:D, 4XO1:A, 4YIZ:B, 4YIZ:D, 4YIZ:F, 5DM6:Z, 5ITM:A, 5ITM:B, 5ITM:C, 5ITM:D, 5ITM:E, 5ITM:F, 1AVY:A, 1HLQ:A, 1ICF:I, 1ISU:A, 1PML:A, 2ATC:B, 2DLB:A, 2GGV:A, d1hlqa_, d1icfi_, d1isua_, d1ppji_, d1rwsa_, d1skza1, d1tdha3, d1yfba1, d2dlba1, d2i9aa2, d2qam01, d2zdra1, d3h31a_, 1avyA00, 1avyB00, 1avyA00, 1avyB00, 1hlqA00, 1icfI00, 1ppjI00, 1rwsA00, 2fd6A02,
3 EEE Ea.Ea-Ep True 2XTT:A, 3CFA:L, 3CFA:M, 3CFA:R, 3CFA:S, 3CFH:L, 3CFH:M, 3CFH:R, 3CFH:S, 3LE4:A, 3MLQ:E, 3MLQ:H, 3TVJ:I, 4F98:A, 4GWT:A, 4N7F:A, 4N7F:B, 4REX:A, 5DZD:B, 5E24:B, 5E24:D, 1NH2:C, 1NVP:C, 2A50:A, 2HIP:A, d1gl0i_, d1goia1, d1kbea_, d1mkna_, d1nh2c_, d1nh2d2, d1o9aa1, d1rl2a2, d2dk1a1, d2hipa_, d2ho2a1, d2jmfa1, 1kbeA00, 1mknA00, 1nh2C00, 1nvpC00, 1o9aA01,
3 EEH Ea.Ca-Ca False 5JBT:Y,
3 HEE 0.Ea-Ca False d1hn6a_, 1hn6A00,
3 EEE Ea.0-0 True 2YFV:C, 2ZJR:U, 3B08:B, 3B08:E, 3B08:H, 3B08:K, 3D2Q:D, 3EGG:D, 3GL6:A, 3HVQ:D, 3KXY:Y, 3MMY:B, 3MMY:D, 3MMY:F, 3MMY:H, 3O7A:A, 3TND:D, 3TND:F, 3ZG9:A, 4EAZ:C, 4EAZ:D, 4LM6:A, 4LM6:C, 4LMS:A, 4LMX:A, 4LMX:C, 4LMX:E, 4LMX:G, 4LMX:I, 4LMX:K, 4MMS:A, 4MMS:C, 4MMS:E, 4Q4W:4, 4QF2:A, 4QF2:B, 4QF2:C, 4QF2:D, 4QF3:A, 4QF3:B, 4WJW:A, 5E4X:A, 5IYZ:E, 5KX5:E, 1D4M:4, 1G3J:B, 1HXS:4, 1J8E:A, 1JY2:O, 1VPZ:A, 1XG0:A, 1XG0:B, 1XU1:R, 2BTI:A, d1cxxa2, d1k0ra4, d1lv3a_, d1wvka_, d1xg0a_, d1xpaa2, d1xu1r_, d1xu2r_, d2btia_, d2bv3a4, d2glia4, d2gtlm2, d2zjru1, d3ryce_, 1e0aB00, 1g3jD00, 1jy2O00, 1lv3A00, 1wvkA00, 1xg0B00, 2fyuI00, 2gliA04,
3 EEE Ep.Ea-Ea True 3Q8J:A, 3QTE:D, 4RBX:A, 5CUM:A, 5CUM:B, 5CUM:C, d1bnba_, d1cbha_, d1cixa_, d1dkca_, d1ewsa_, d1kqha_, d1p8ba_, d1q3ja_, d2jdqd_, 1cixA00, 1cixA00,
4 EEEE 0.Ea.Ea-0.Ep-0 True 3R45:C, 3UL5:A, 3UL5:B, 3UL5:D, 4TX4:A, 4TX4:B,
4 EEEE Ea.0.0-0.0-0 True 1L2W:I, 1RGV:A, 1WZ3:A, 2FGO:A, 4BL0:B, d1l2wi_, d1wz3a1, d2fgoa_,
4 EEEE 0.0.Ea-0.0-0 True 3ZIA:I, 3ZIA:S, 5LSL:E, 5LSL:G, 5LSL:H, 2DSR:G, d2dsrg1,
4 EEEH 0.Ea.0-0.0-0 True 2YNZ:A, 2YNZ:B, 2YNZ:C, 3C9I:A, 3C9I:B, 3C9I:C, 3C9I:D, 3C9I:E, 3C9I:F, 3ZMF:C, 5BU5:A, 5BU5:B, 5BU5:C, 5BU5:D, 5BU5:E, 5BU5:F, 5BU8:A, 5BU8:B,
5 EEEEE Ea.0.0.Ea-0.0.0-0.0-0 True 3O27:A, 1MVF:D, d1mvfd_, 1mvfD00,
6 EEEEEH Ea.0.0.Ea.0-0.0.0.0-0.0.0-0.0-0 False 1ub4C00,
Protein In ProLegoDB with identical/similar Topology