Protein Detail

Protein Information

PDBId & Chain	3M20 : B
Molecule	4-oxalocrotonate tautomerase, putative
Residues	58
Sequence
SSE Sequence^*(5)	`EHEEE`

^* Secondary structure Elements (SSE) from N to C terminal of the PDB chain. [SSE: H ("Alpha Helix"); E ("Strands")]

Protein Topology

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand] `Ca.Ca.0.Ea-Ep.0.0-0.0-0`

Prefence of topology : True

[ Hover over the plot rectangles to know more about SSE-contact ]

Linear Topology Graph : 3M20_B

Protein Id: 3M20_B

Figure Detail - Blocks: Helix (rectangles), Strands (triangles); Colormap: Red (N-terminal),--(Green)-- Blue (C-Terminal). Spatial Connectivity by arc Lines [Hover over the image to know the SSE detail]

Topology Graph : 3M20_B

Protein Id: 3M20_B

Expand

Figure Detail - Blocks: Helix (circle), Strands (arrow); Colormap: Red (N-terminal), Blue (C-Terminal). Spatial Connectivity by dotted Lines [Hover over the image to know the SSE detail]

Modules in queried Topology

#SSE	SSE string	Contact String	Preferrence	ProteinDB	DomainsDB
3	EHE	Ca.Ca-Ep	True	2X4K:B, 3EJ9:B, 3EJ9:D, 3EJ9:F, 3MB2:B, 3MB2:D, 3MB2:F, 3MB2:H, 3MB2:J, 3MB2:L, 4X1C:B, 2PJR:B,	d3ej9b_,
3	EEE	0.Ea-0	True	2Y8T:B, 2Y8T:E, 2ZJR:Z, 3H31:A, 3O27:B, 3SF4:D, 3SF4:E, 3SF4:F, 4I6M:D, 4XO1:A, 4YIZ:B, 4YIZ:D, 4YIZ:F, 5DM6:Z, 5ITM:A, 5ITM:B, 5ITM:C, 5ITM:D, 5ITM:E, 5ITM:F, 1AVY:A, 1HLQ:A, 1ICF:I, 1ISU:A, 1PML:A, 2ATC:B, 2DLB:A, 2GGV:A,	d1hlqa_, d1icfi_, d1isua_, d1ppji_, d1rwsa_, d1skza1, d1tdha3, d1yfba1, d2dlba1, d2i9aa2, d2qam01, d2zdra1, d3h31a_, 1avyA00, 1avyB00, 1avyA00, 1avyB00, 1hlqA00, 1icfI00, 1ppjI00, 1rwsA00, 2fd6A02,

Protein In ProLegoDB with identical/similar Topology

Proteins with Identical Topology

[Same secondary structure composition, contact-pair and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
2X4K	A	62	Probable tautomerase SAR1376	View
3ABF	B	63	4-oxalocrotonate tautomerase	View
3ABF	E	61	4-oxalocrotonate tautomerase	View
3ABF	F	63	4-oxalocrotonate tautomerase	View
3EJ9	A	62	Alpha-subunit of trans-3-chloroacrylic acid dehalogenase	View
3EJ9	C	63	Alpha-subunit of trans-3-chloroacrylic acid dehalogenase	View
3EJ9	E	64	Alpha-subunit of trans-3-chloroacrylic acid dehalogenase	View
3M20	A	59	4-oxalocrotonate tautomerase, putative	View
3M20	C	58	4-oxalocrotonate tautomerase, putative	View
3M21	C	63	Probable tautomerase HP_0924	View
3M21	E	65	Probable tautomerase HP_0924	View
3MB2	A	61	4-oxalocrotonate tautomerase family enzyme	View
3MB2	C	62	4-oxalocrotonate tautomerase family enzyme	View
3MB2	E	61	4-oxalocrotonate tautomerase family enzyme	View
3MB2	G	61	4-oxalocrotonate tautomerase family enzyme	View
3MB2	I	60	4-oxalocrotonate tautomerase family enzyme	View
3MB2	K	62	4-oxalocrotonate tautomerase family enzyme	View
4FAZ	C	62	Tautomerase	View
4X1C	A	57	2-hydroxymuconate tautomerase	View
4X1C	C	58	2-hydroxymuconate tautomerase	View
4X1C	D	58	2-hydroxymuconate tautomerase	View
4X1C	E	58	2-hydroxymuconate tautomerase	View
4X1C	F	56	2-hydroxymuconate tautomerase	View
4X1C	I	56	2-hydroxymuconate tautomerase	View
4X1C	J	56	2-hydroxymuconate tautomerase	View
4X1C	K	57	2-hydroxymuconate tautomerase	View
4X1C	L	57	2-hydroxymuconate tautomerase	View
4X1C	M	56	2-hydroxymuconate tautomerase	View
4X1C	N	57	2-hydroxymuconate tautomerase	View
4X1C	O	57	2-hydroxymuconate tautomerase	View
1OTF	A	59	2-hydroxymuconate tautomerase	View
2OPA	A	61	2-hydroxymuconate tautomerase	View
d1otfa_	--	59	u'2-hydroxymuconate tautomerase'	View
d2x4ka_	--	62	u'Probable tautomerase SAR1376'	View
d3ej9a_	--	62	u'Alpha-subunit of trans-3-chloroacrylic acid dehalogenase'	View
1otfA00	--	59	2-hydroxymuconate tautomerase	View

Protein with similar Topology [same scaffold]

[Same secondary structure composition and contact-pair but of different orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology

Proteins with topologies of same secondary structure (H/E) component

[Topologies with same secondary structure composition with different contact-pairs and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
3CJS	A	58	Ribosomal protein L11 methyltransferase	View
3HSH	A	56	Collagen alpha-1(XVIII) chain	View
3HSH	B	56	Collagen alpha-1(XVIII) chain	View
3HSH	C	56	Collagen alpha-1(XVIII) chain	View
3HSH	D	56	Collagen alpha-1(XVIII) chain	View
3HSH	E	55	Collagen alpha-1(XVIII) chain	View
3HSH	F	56	Collagen alpha-1(XVIII) chain	View
3N3F	A	54	Collagen alpha-1(XV) chain	View
3N3F	B	53	Collagen alpha-1(XV) chain	View
3RPF	D	63	Molybdopterin converting factor, subunit 1 (MoaD)	View
3UEP	A	85	Yop proteins translocation protein Q	View
3UEP	B	85	Yop proteins translocation protein Q	View
4FPR	B	128	Uncharacterized protein	View
4FPR	D	127	Uncharacterized protein	View
4TT9	A	70	Surface presentation of antigens protein SpaO	View
4TT9	B	72	Surface presentation of antigens protein SpaO	View
4TT9	C	72	Surface presentation of antigens protein SpaO	View
4TT9	D	68	Surface presentation of antigens protein SpaO	View
4Y28	C	80	Photosystem I iron-sulfur center	View
4YX7	B	67	Surface presentation of antigens protein SpaO	View
4YX7	E	66	Surface presentation of antigens protein SpaO	View
4ZOQ	F	62	Intracellular serine protease	View
4ZOQ	H	62	Intracellular serine protease	View
5MAO	A	71	Heat resistant RNA dependent ATPase	View
5MAO	B	71	Heat resistant RNA dependent ATPase	View
5VBD	A	85	Probable ubiquitin carboxyl-terminal hydrolase FAF-X	View
1O9Y	A	71	Type III secretion protein HrcQb	View
2PJS	A	112	Uncharacterized protein	View

Topology view of query protein [ProLego results]

3M20 : B

Topology Information