Protein Detail

Protein Information

PDBId & Chain	3L7Q : I
Molecule	Putative translation initiation inhibitor aldR regulator-like protein
Residues	124
Sequence
SSE Sequence^*(7)	`EEHEHEE`

^* Secondary structure Elements (SSE) from N to C terminal of the PDB chain. [SSE: H ("Alpha Helix"); E ("Strands")]

Protein Topology

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand] `Ea.Ca.0.Ca.Ca.0-0.0.Hp.Ep.Cp-0.0.0.Ea-0.0.Cp-0.Ea-0`

Prefence of topology : False

[ Hover over the plot rectangles to know more about SSE-contact ]

Linear Topology Graph : 3L7Q_I

Protein Id: 3L7Q_I

Figure Detail - Blocks: Helix (rectangles), Strands (triangles); Colormap: Red (N-terminal),--(Green)-- Blue (C-Terminal). Spatial Connectivity by arc Lines [Hover over the image to know the SSE detail]

Topology Graph : 3L7Q_I

Protein Id: 3L7Q_I

Expand

Figure Detail - Blocks: Helix (circle), Strands (arrow); Colormap: Red (N-terminal), Blue (C-Terminal). Spatial Connectivity by dotted Lines [Hover over the image to know the SSE detail]

Modules in queried Topology

#SSE	SSE string	Contact String	Preferrence	ProteinDB	DomainsDB
3	EEH	Ea.Ca-0	True	3OW2:T, 1VQO:U, 2PUY:A,	d1vq8u1, d1we9a_, d1wjva1, d2puya_, 1vq8U00,
3	EHE	Ca.Ca-Ep	True	2X4K:B, 3EJ9:B, 3EJ9:D, 3EJ9:F, 3MB2:B, 3MB2:D, 3MB2:F, 3MB2:H, 3MB2:J, 3MB2:L, 4X1C:B, 2PJR:B,	d3ej9b_,
4	EEHE	Ea.Ca.0-0.0-0	False

Protein In ProLegoDB with identical/similar Topology

Proteins with Identical Topology

[Same secondary structure composition, contact-pair and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
5HP7	A	108	Reactive Intermediate Deaminase A, chloroplastic	View

Protein with similar Topology [same scaffold]

[Same secondary structure composition and contact-pair but of different orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology

Proteins with topologies of same secondary structure (H/E) component

[Topologies with same secondary structure composition with different contact-pairs and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
3AH7	A	109	[2Fe-2S]ferredoxin	View
3AV8	A	97	Ferredoxin-1	View
3AV8	B	97	Ferredoxin-1	View
3AV8	C	97	Ferredoxin-1	View
3AV8	D	97	Ferredoxin-1	View
3HCT	A	104	TNF receptor-associated factor 6	View
3K12	A	113	Uncharacterized protein	View
3K12	B	112	Uncharacterized protein	View
3K12	C	113	Uncharacterized protein	View
3K12	D	118	Uncharacterized protein	View
3K12	F	112	Uncharacterized protein	View
3L7Q	E	124	Putative translation initiation inhibitor aldR regulator-like protein	View
3LXF	A	104	Ferredoxin	View
3LXF	B	104	Ferredoxin	View
3LXF	C	104	Ferredoxin	View
3LXF	D	104	Ferredoxin	View
3LXF	E	104	Ferredoxin	View
3OON	A	111	Outer membrane protein	View
4FXC	A	98	Ferredoxin	View
4LTU	A	106	Ferredoxin	View
4LTU	B	106	Ferredoxin	View
4NTK	D	119	6-carboxy-5,6,7,8-tetrahydropterin synthase	View
4NTK	F	120	6-carboxy-5,6,7,8-tetrahydropterin synthase	View
5FFI	E	102	Dimeric (2Fe-2S) protein	View
1I7H	A	109	2Fe-2S ferredoxin	View
1VCC	A	77	DNA topoisomerase 1B	View
1XLQ	A	106	Putidaredoxin	View

Topology view of query protein [ProLego results]

3L7Q : I

Topology Information