ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
Advance Search
Residue >=
Residue <=
Molecule: [Protein molecule containing the word as query]
Source: [Source organism of protein ]
 
 help

Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d4a3na_ a.21.1.0 65 see topology u'Transcription factor SOX-17' Homo sapiens
ASTRAL-1.75B d4aaza_ g.3.7.5 47 see topology u'Flower-specific defensin' Nicotiana alata
ASTRAL-1.75B d4ac9a1 b.43.3.1 91 see topology u'MJ0495-like protein' Methanococcus maripaludis
ASTRAL-1.75B d4ac9a2 b.43.3.1 79 see topology u'MJ0495-like protein' Methanococcus maripaludis
ASTRAL-1.75B d4ac9a3 b.44.1.1 113 see topology u'MJ0495-like protein' Methanococcus maripaludis
ASTRAL-1.75B d4ac9a4 c.37.1.8 158 see topology u'MJ0495-like protein' Methanococcus maripaludis
ASTRAL-1.75B d4aeaa_ g.7.1.1 67 see topology u'Alpha-elapitoxin-Nk2a' Naja kaouthia
ASTRAL-1.75B d4affa_ d.58.5.1 110 see topology u'Nitrogen regulatory protein P-II' Synechococcus elongatus
ASTRAL-1.75B d4av5a_ b.2.3.2 158 see topology u'Protein FimH' Escherichia coli
ASTRAL-1.75B d4dfaa_ b.40.1.1 129 see topology u'Thermonuclease' Staphylococcus aureus
ASTRAL-1.75B d4f1va_ c.94.1.1 372 see topology u'Phosphate-binding protein PstS' Pseudomonas fluorescens
ASTRAL-1.75B d4geva_ d.117.1.1 263 see topology u'Thymidylate synthase' Escherichia coli
ASTRAL-1.75B d4sgbi_ g.69.1.1 51 see topology u'Proteinase inhibitor type-2 K' Solanum tuberosum
ASTRAL-1.75B d4tmka_ c.37.1.1 210 see topology u'Thymidylate kinase' Escherichia coli
ASTRAL-1.75B d4ubpa_ d.8.1.1 100 see topology u'Urease subunit gamma' Sporosarcina pasteurii
ASTRAL-1.75B d4ubpb_ b.85.3.1 122 see topology u'Urease subunit beta' Sporosarcina pasteurii
ASTRAL-1.75B d4ubpc1 b.92.1.1 180 see topology u'Urease subunit alpha' Sporosarcina pasteurii
ASTRAL-1.75B d4ubpc2 c.1.9.2 389 see topology u'Urease subunit alpha' Sporosarcina pasteurii
ASTRAL-1.75B d5csma_ a.130.1.2 250 see topology u'Chorismate mutase' Saccharomyces cerevisiae
ASTRAL-1.75B d5eaua1 a.102.4.1 200 see topology u'5-epi-aristolochene synthase' Nicotiana tabacum
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins